RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 FOXS1O43638 330 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 KIAA0513O60268 411 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 NSA2O95478 260 aaKnown RBP18.18■□□□□ 0.5
FAM3A-215ENST00000447601 NR4A1P22736 598 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 STT3AP46977 705 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 EPHA4P54764 986 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 ZNF155Q12901 538 aaPredicted RBP18.18■□□□□ 0.5
FAM3A-215ENST00000447601 SLC13A2Q13183 592 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 DECR1Q16698 335 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 GALNT12Q8IXK2 581 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 ZNF595Q8IYB9 648 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 OR6C4Q8NGE1 309 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 PIGXQ8TBF5 258 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 TGM7Q96PF1 710 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 CDCA4Q9BXL8 241 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 POLR2J2Q9GZM3 115 aaKnown RBP18.18■□□□□ 0.5
FAM3A-215ENST00000447601 CHRNA10Q9GZZ6 450 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 RAB33BQ9H082 229 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 TBC1D17Q9HA65 648 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 SOHLH2Q9NX45 425 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 EPHA6Q9UF33 1036 aa18.18■□□□□ 0.5
FAM3A-215ENST00000447601 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.18■□□□□ 0.5
FAM3A-215ENST00000447601 RHPN2P1A8MT19 583 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 SOX1O00570 391 aaPredicted RBP18.17■□□□□ 0.5
FAM3A-215ENST00000447601 ENTPD6O75354 484 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 SLC15A1P46059 708 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 GABRA4P48169 554 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 POU6F2P78424 691 aaPredicted RBP18.17■□□□□ 0.5
FAM3A-215ENST00000447601 TSPAN31Q12999 210 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 IRF3Q14653 427 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 TIGD6Q17RP2 521 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 TCTE1Q5JU00 501 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 RANBP3LQ86VV4 465 aaPredicted RBP18.17■□□□□ 0.5
FAM3A-215ENST00000447601 OR52R1Q8NGF1 315 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 ACOT11Q8WXI4 607 aaPredicted RBP18.17■□□□□ 0.5
FAM3A-215ENST00000447601 PIK3R3Q92569 461 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 CLDN23Q96B33 292 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 ZDHHC12Q96GR4 267 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 SLC41A3Q96GZ6 507 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 CD180Q99467 661 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 GPA33Q99795 319 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 POLDIP3Q9BY77 421 aaKnown RBP18.17■□□□□ 0.5
FAM3A-215ENST00000447601 RBCK1Q9BYM8 510 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 SLC25A19Q9HC21 320 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 PDE7BQ9NP56 450 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 IRAK4Q9NWZ3 460 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 SCN3AQ9NY46 2000 aa18.17■□□□□ 0.5
FAM3A-215ENST00000447601 HYKKA2RU49 373 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 STK25O00506 426 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 CLDN4O14493 209 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 CTNSO60931 367 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 CNOT3O75175 753 aaKnown RBP18.16■□□□□ 0.5
FAM3A-215ENST00000447601 CLPXO76031 633 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 NKX2-2O95096 273 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 MED26O95402 600 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 CBX7O95931 251 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 ADORA3P0DMS8 318 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 NID1P14543 1247 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 CD36P16671 472 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 GABRA3P34903 492 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 SMSP52788 366 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 C21orf59P57076 290 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 LSM11P83369 360 aaKnown RBP eCLIP18.16■□□□□ 0.5
FAM3A-215ENST00000447601 HOXC5Q00444 222 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 STX4Q12846 297 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 HOXB13Q92826 284 aaPredicted RBP18.16■□□□□ 0.5
FAM3A-215ENST00000447601 ARMC7Q9H6L4 198 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 PLGRKTQ9HBL7 147 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 SDC3O75056 442 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 PIAS2O75928 621 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 TGFBR2P37173 567 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 GIPRP48546 466 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 PCYT1AP49585 367 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 CSNK1EP49674 416 aaKnown RBP18.16■□□□□ 0.5
FAM3A-215ENST00000447601 GFERP55789 205 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 CDK5Q00535 292 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 GINS1Q14691 196 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 ZNHIT3Q15649 155 aaPredicted RBP18.16■□□□□ 0.5
FAM3A-215ENST00000447601 OCLNQ16625 522 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 MEDAGQ5VYS4 303 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 PLAG1Q6DJT9 500 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 GDF7Q7Z4P5 450 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 TEX47Q8TBZ9 253 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 PEX11GQ96HA9 241 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 TVP23BQ9NYZ1 205 aa18.16■□□□□ 0.5
FAM3A-215ENST00000447601 RPL36Q9Y3U8 105 aaKnown RBP18.16■□□□□ 0.5
FAM3A-215ENST00000447601 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 CENPVL1A0A0U1RR11 272 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 BRINP1O60477 761 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 IGLV3-21P80748 117 aaPredicted RBP18.15■□□□□ 0.5
FAM3A-215ENST00000447601 MAPK14Q16539 360 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 MOGQ16653 247 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 SLC25A30Q5SVS4 291 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 MFSD4BQ5TF39 518 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 AP1ARQ63HQ0 302 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 RASSF6Q6ZTQ3 369 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 ZNF367Q7RTV3 350 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 PRICKLE2Q7Z3G6 844 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 FAM26EQ8N5C1 309 aa18.15■□□□□ 0.5
FAM3A-215ENST00000447601 IQCF1Q8N6M8 205 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms