RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SLC15A4Q8N697 577 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 CHDHQ8NE62 594 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 FAM110BQ8TC76 370 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 SLC38A5Q8WUX1 472 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 TMEM19Q96HH6 336 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 ADOQ96SZ5 270 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 BTBD10Q9BSF8 475 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 C1orf21Q9H246 121 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 PRORYQ9H606 182 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 A4GALTQ9NPC4 353 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 FLRT3Q9NZU0 649 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 PCDHGB3Q9Y5G1 929 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 PKD1L2Q7Z442 2459 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 PCNX3Q9H6A9 2034 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 FAM220BPB1ANY3 271 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 HNRNPCL1O60812 293 aaKnown RBP16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 UGT2B11O75310 529 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 PPM1BO75688 479 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 H6PDO95479 791 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 IL33O95760 270 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 WDPCPO95876 746 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 TFPTP0C1Z6 253 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 FBXO45P0C2W1 286 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 CYP4B1P13584 511 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 IL12BP29460 328 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 KRT20P35900 424 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 POLE2P56282 527 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 MFAP5Q13361 173 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 CEACAM7Q14002 265 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 SCARB2Q14108 478 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 OPN5Q6U736 354 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 HMGN2P46Q86SG4 172 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 SERPINA11Q86U17 422 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 FAM156AQ8NDB6 213 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 FAM13CQ8NE31 585 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 SPACA9Q96E40 222 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 CLPTM1LQ96KA5 538 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 THTPAQ9BU02 230 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 TMEM38AQ9H6F2 299 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 RUBCNLQ9H714 662 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 THUMPD1Q9NXG2 353 aaKnown RBP16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 ABI3Q9P2A4 366 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 AP3M1Q9Y2T2 418 aa16.56■□□□□ 0.24
TRAPPC4-203ENST00000447216 PRORSD1PA6NEY8 169 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 FCMRO60667 390 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 PDE5AO76074 875 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 SORBS2O94875 1100 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 SOX30O94993 753 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 AK1P00568 194 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 TCN1P20061 433 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 MSX2P35548 267 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 HLCSP50747 726 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 CDK6Q00534 326 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 OC90Q02509 493 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 CHRNEQ04844 493 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZSCAN26Q16670 478 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 COL28A1Q2UY09 1125 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZNF791Q3KP31 576 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 DNAL1Q4LDG9 190 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 LACTB2Q53H82 288 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 SAMD4BQ5PRF9 694 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 FRRS1Q6ZNA5 592 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 MICU2Q8IYU8 434 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 C11orf65Q8NCR3 313 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 OR2T12Q8NG77 320 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 OR10G3Q8NGC4 313 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 DIO2Q92813 273 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 REXO5Q96IC2 774 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 COL21A1Q96P44 957 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 TRNT1Q96Q11 434 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 KCTD14Q9BQ13 255 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 SPATA9Q9BWV2 254 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 SLC38A1Q9H2H9 487 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 ALG2Q9H553 416 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 HPF1Q9NWY4 346 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 MKLN1Q9UL63 735 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 LIPT1Q9Y234 373 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 WDR45Q9Y484 360 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 USP24Q9UPU5 2620 aa16.55■□□□□ 0.24
TRAPPC4-203ENST00000447216 TMEM247A6NEH6 219 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 C5orf58C9J3I9 102 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 K7EM74 188 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 ICOSLGO75144 302 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 STX11O75558 287 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 UTS2O95399 124 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 ATP6V1C1P21283 382 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 AQP1P29972 269 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 PCGF2P35227 344 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 CD96P40200 585 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 RASSF2P50749 326 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 RNF144AP50876 292 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 HPCAP84074 193 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 TUBA3CQ13748 450 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 GPR68Q15743 365 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 NTRK2Q16620 822 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 ST3GAL2Q16842 350 aa16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZNF630Q2M218 657 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC4-203ENST00000447216 VMACQ2NL98 169 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms