RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 KIF13BQ9NQT8 1826 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SSC5DA1L4H1 1573 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 KIAA0355O15063 1070 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 LCATP04180 440 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 PRLHRP49683 370 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 INHBCP55103 352 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SLC26A5P58743 744 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SHISA6Q6ZSJ9 500 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 OR5K2Q8NHB8 316 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SFXN5Q8TD22 340 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 RLN3Q8WXF3 142 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 FUBP1Q96AE4 644 aaKnown RBP10.62□□□□□ -0.71
FN1-211ENST00000443816 CIDECQ96AQ7 238 aaPredicted RBP10.62□□□□□ -0.71
FN1-211ENST00000443816 SLC30A2Q9BRI3 323 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 TTTY10Q9BZA0 68 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 COL18A1P39060 1754 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 RABL3Q5HYI8 236 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 PARS2Q7L3T8 475 aaKnown RBP10.62□□□□□ -0.71
FN1-211ENST00000443816 TMEM173Q86WV6 379 aaPredicted RBP10.62□□□□□ -0.71
FN1-211ENST00000443816 ZADH2Q8N4Q0 377 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 KDM1BQ8NB78 822 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 OR8K3Q8NH51 312 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 CHPT1Q8WUD6 406 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 BTBD2Q9BX70 525 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SOX17Q9H6I2 414 aaPredicted RBP10.62□□□□□ -0.71
FN1-211ENST00000443816 ZNF160Q9HCG1 818 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 F5P12259 2224 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 LINC01553A4QN01 128 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 RDH16O75452 317 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 S100A7P31151 101 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 AHRP35869 848 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 NAA10P41227 235 aaPredicted RBP10.62□□□□□ -0.71
FN1-211ENST00000443816 SOX2P48431 317 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 VMACQ2NL98 169 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 HSD11B1LQ7Z5J1 315 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 ACOT4Q8N9L9 421 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 TMEM178AQ8NBL3 297 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SEC14L1Q92503 715 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 CREB3L1Q96BA8 519 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 DYNLRB1Q9NP97 96 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 CUTCQ9NTM9 273 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 OR52A4PA6NMU1 304 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 RBBP9O75884 186 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 PLATP00750 562 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 GPLD1P80108 840 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 C3orf38Q5JPI3 329 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SCD5Q86SK9 330 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 OR7G3Q8NG95 312 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 RHBDF1Q96CC6 855 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 PHF7Q9BWX1 381 aaPredicted RBP10.62□□□□□ -0.71
FN1-211ENST00000443816 ZNF700Q9H0M5 742 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SLC7A8Q9UHI5 535 aa10.62□□□□□ -0.71
FN1-211ENST00000443816 SMAD6O43541 496 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 FGF3P11487 239 aaPredicted RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 GTF2F2P13984 249 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 TCN2P20062 427 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 RBMXP38159 391 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 CSNK1A1P48729 337 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 SSR4P51571 173 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 DIO3P55073 304 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 APOFQ13790 326 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 MARCH8Q5T0T0 291 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 PHTF2Q8N3S3 785 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 C19orf47Q8N9M1 422 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 OR9A2Q8NGT5 310 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 CCDC120Q96HB5 630 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 PCDHA9Q9Y5H5 950 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 H0YAE9 185 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 RFPL1O75677 317 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 HOXD9P28356 352 aaPredicted RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 TRIM61Q5EBN2 209 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 OR8H3Q8N146 312 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 METTL2AQ96IZ6 378 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 PKP2Q99959 881 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 SEMA6CQ9H3T2 930 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 SMCO3A2RU48 225 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 C2orf72A6NCS6 295 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 ETFAP13804 333 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 EIF2DP41214 584 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 SLC6A11P48066 632 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 POLR2HP52434 150 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 ERVK-16P61578 105 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 RPS26P62854 115 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 RACK1P63244 317 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 ADAM17P78536 824 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 ATP6AP1Q15904 470 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 ZBED5Q49AG3 693 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 KCTD9Q7L273 389 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 MSLNLQ96KJ4 702 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 SECISBP2Q96T21 854 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 LMF2Q9BU23 707 aaKnown RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 ZBP1Q9H171 429 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 ATXN7L1Q9ULK2 861 aaPredicted RBP10.61□□□□□ -0.71
FN1-211ENST00000443816 KANK2Q63ZY3 851 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 AWAT2Q6E213 333 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 ZNF765Q7L2R6 523 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 GPR149Q86SP6 731 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 ACBD7Q8N6N7 88 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 GLIS1Q8NBF1 620 aa10.61□□□□□ -0.71
FN1-211ENST00000443816 OR52B6Q8NGF0 335 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms