RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CTIFO43310 598 aaKnown RBP18.26■□□□□ 0.51
LRCH3-208ENST00000443727 PEX11AO75192 247 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 PSMG1O95456 288 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 BPGMP07738 259 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 PRPS2P11908 318 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 BCKDHAP12694 445 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 TCEA1P23193 301 aaKnown RBP18.26■□□□□ 0.51
LRCH3-208ENST00000443727 GABRA3P34903 492 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 TIMP3P35625 211 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 PRKAG1P54619 331 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 MYBPHQ13203 477 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 UGT3A2Q3SY77 523 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 VPS26BQ4G0F5 336 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 ATP6AP1LQ52LC2 224 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 NSUN5P2Q63ZY6 315 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 AAGABQ6PD74 315 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 NUDCD3Q8IVD9 361 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 TRIM42Q8IWZ5 723 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 DMRTC2Q8IXT2 367 aaPredicted RBP18.26■□□□□ 0.51
LRCH3-208ENST00000443727 CEP70Q8NHQ1 597 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 GPR151Q8TDV0 419 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 SFXN2Q96NB2 322 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 LMF2Q9BU23 707 aaKnown RBP18.26■□□□□ 0.51
LRCH3-208ENST00000443727 MCCC2Q9HCC0 563 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 FBN2P35556 2912 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 DCHS2Q6V1P9 2916 aa18.26■□□□□ 0.51
LRCH3-208ENST00000443727 INTS1Q8N201 2190 aaKnown RBP18.25■□□□□ 0.51
LRCH3-208ENST00000443727 KDM4EB2RXH2 506 aaPredicted RBP18.25■□□□□ 0.51
LRCH3-208ENST00000443727 TBX19O60806 448 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 SKAP2O75563 359 aaPredicted RBP18.25■□□□□ 0.51
LRCH3-208ENST00000443727 KCNH1O95259 989 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 IFI6P09912 130 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 DPP4P27487 766 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 ZNF844Q08AG5 666 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 STX5Q13190 355 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 ZNF385BQ569K4 471 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 LRIG3Q6UXM1 1119 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 MTERF3Q96E29 417 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 ZNF559Q9BR84 538 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 CALHM2Q9HA72 323 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 GIMAP2Q9UG22 337 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 ABCG2Q9UNQ0 655 aa18.25■□□□□ 0.51
LRCH3-208ENST00000443727 RPH3AQ9Y2J0 694 aaPredicted RBP18.25■□□□□ 0.51
LRCH3-208ENST00000443727 CD8B2A6NJW9 211 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 TYROBPO43914 113 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 HSPA4LO95757 839 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 IL33O95760 270 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 CPN1P15169 458 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 UQCRC1P31930 480 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 CEACAM8P31997 349 aaPredicted RBP18.24■□□□□ 0.51
LRCH3-208ENST00000443727 RPL3P39023 403 aaKnown RBP18.24■□□□□ 0.51
LRCH3-208ENST00000443727 PDE7AQ13946 482 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 NAXEQ8NCW5 288 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 NUP43Q8NFH3 380 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 ZPLD1Q8TCW7 415 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 SLC9A6Q92581 669 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 RMND5BQ96G75 393 aaPredicted RBP18.24■□□□□ 0.51
LRCH3-208ENST00000443727 PKNOX2Q96KN3 472 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 TBL1XR1Q9BZK7 514 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 DSN1Q9H410 356 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 ACSS1Q9NUB1 689 aaPredicted RBP18.24■□□□□ 0.51
LRCH3-208ENST00000443727 FAM120CQ9NX05 1096 aaKnown RBP18.24■□□□□ 0.51
LRCH3-208ENST00000443727 ZNF629Q9UEG4 869 aaPredicted RBP18.24■□□□□ 0.51
LRCH3-208ENST00000443727 KCNN3Q9UGI6 736 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 ZDHHC2Q9UIJ5 367 aa18.24■□□□□ 0.51
LRCH3-208ENST00000443727 WDR91A4D1P6 747 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 FADS1O60427 444 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 UTS2O95399 124 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 CAPN3P20807 821 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 EFNA1P20827 205 aaPredicted RBP18.23■□□□□ 0.51
LRCH3-208ENST00000443727 SERPINB4P48594 390 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 STARP49675 285 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 DGKQP52824 942 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 GAS1P54826 345 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 DSCR4P56555 118 aaPredicted RBP18.23■□□□□ 0.51
LRCH3-208ENST00000443727 XKR7Q5GH72 579 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 CES4AQ5XG92 561 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 CDRT4Q8N9R6 151 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 FNDC5Q8NAU1 212 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 RNF138Q8WVD3 245 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 PIK3R3Q92569 461 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 TUBGCP3Q96CW5 907 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 MS4A4EQ96PG1 132 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 TUBA1CQ9BQE3 449 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 C1orf50Q9BV19 199 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 PTGES2Q9H7Z7 377 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 FLRT3Q9NZU0 649 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 MRPS18CQ9Y3D5 142 aaKnown RBP18.23■□□□□ 0.51
LRCH3-208ENST00000443727 TACC2O95359 2948 aa18.23■□□□□ 0.51
LRCH3-208ENST00000443727 CSMD1Q96PZ7 3565 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 HCFC1P51610 2035 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 GXYLT2A0PJZ3 443 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 C17orf51A8MQB3 221 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 SCAMP2O15127 329 aaKnown RBP18.22■□□□□ 0.51
LRCH3-208ENST00000443727 EMC8O43402 210 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 ARRB2P32121 409 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 ETV4P43268 484 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 ASCL1P50553 236 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 GFRA1P56159 465 aa18.22■□□□□ 0.51
LRCH3-208ENST00000443727 KRTAP10-9P60411 292 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms