RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SLC22A1O15245 554 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 CHST10O43529 356 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 ALOX12BO75342 701 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 BCL10O95999 233 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF16P17020 682 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF28P17035 718 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 PPP2R1BP30154 601 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC15A1P46059 708 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 NEK2P51955 445 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 TEKQ02763 1124 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 MAD2L1Q13257 205 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAM69BQ5VUD6 431 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 ALKBH2Q6NS38 261 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 TSPYL5Q86VY4 417 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 EXOSC8Q96B26 276 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 NRTNQ99748 197 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 SEMA3GQ9NS98 782 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 HPF1Q9NWY4 346 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 EIF3LQ9Y262 564 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 UGT2A1Q9Y4X1 527 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 DSPPQ9NZW4 1301 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 DIDO1Q9BTC0 2240 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 GLOD5A6NK44 160 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 PSIP1O75475 530 aaKnown RBP6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 REM1O75628 298 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 ETHE1O95571 254 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 GBAP04062 536 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZGLP1P0C6A0 271 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 OCM2P0CE71 109 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 OCMP0CE72 109 aaPredicted RBP6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 FGF5P12034 268 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 ACADLP28330 430 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 MAPK1P28482 360 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 LIPAP38571 399 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 ST13P50502 369 aaKnown RBP6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 MPEG1Q2M385 716 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR4F3Q6IEY1 312 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF770Q6IQ21 691 aaPredicted RBP6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 RHBDD2Q6NTF9 364 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC44A2Q8IWA5 706 aaPredicted RBP6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 RNF175Q8N4F7 328 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR5L2Q8NGL0 311 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR2A1Q8NGT9 310 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 ASB15Q8WXK1 588 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 KCNC2Q96PR1 638 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 EPYCQ99645 322 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF451Q9Y4E5 1061 aa6.9□□□□□ -1.31
CDC42BPA-208ENST00000442054 CLDN25C9JDP6 229 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ACOT7O00154 380 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 BCKDKO14874 412 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 MT-ND2P03891 347 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 STAT5AP42229 794 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 PER3P56645 1201 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 RPS13P62277 151 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 SELENBP1Q13228 472 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CLN3Q13286 438 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 RFX4Q33E94 735 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 FCRLBQ6BAA4 426 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 FRMPD2BQ6IN97 320 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CCDC80Q76M96 950 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 EIF3MQ7L2H7 374 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMEM151BQ8IW70 566 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR4N5Q8IXE1 308 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 RHOXF1Q8NHV9 184 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 MIPOL1Q8TD10 442 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 DOK4Q8TEW6 326 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CHTF18Q8WVB6 975 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 KLHL6Q8WZ60 621 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 RPL3LQ92901 407 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ABTB1Q969K4 478 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 COQ8BQ96D53 544 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR52E6Q96RD3 313 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 FUZQ9BT04 418 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 TAPBPLQ9BX59 468 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 PRRG4Q9BZD6 226 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ADAP2Q9NPF8 381 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 MS4A12Q9NXJ0 267 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZNF226Q9NYT6 803 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 SELENONQ9NZV5 590 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CTSFQ9UBX1 484 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 PILRAQ9UKJ1 303 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMED5Q9Y3A6 229 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 MN1Q10571 1320 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 TRBC2A0A5B9 178 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 METTL15A6NJ78 407 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 KCNK2O95069 426 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 STAMBPO95630 424 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 ANKRD34CP0C6C1 535 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 CHMP24386 653 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 BCL6P41182 706 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 AIMP2Q13155 320 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 VEZF1Q14119 521 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 NPTX1Q15818 432 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 SYT16Q17RD7 645 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 VMACQ2NL98 169 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR2T5Q6IEZ7 315 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 MED25Q71SY5 747 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 KANSL1Q7Z3B3 1105 aa6.89□□□□□ -1.31
CDC42BPA-208ENST00000442054 VTCN1Q7Z7D3 282 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms