RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ADRA1AP35348 466 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 DLSTP36957 453 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SLC1A3P43003 542 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CRATP43155 626 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SYKP43405 635 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CEBPDP49716 269 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 BCAP31P51572 246 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 GEMP55040 296 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ATP5IP56385 69 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZXDAP98168 799 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MYBPC1Q00872 1141 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 IL18Q14116 193 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CAPRIN1Q14444 709 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 RBM39Q14498 530 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 AGKQ53H12 422 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SLC25A53Q5H9E4 307 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MTX3Q5HYI7 312 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 IL23RQ5VWK5 629 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 LIPKQ5VXJ0 399 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SLC25A25Q6KCM7 469 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 C1orf94Q6P1W5 598 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CCDC137Q6PK04 289 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 RFPL4BQ6ZWI9 263 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 TRMT1LQ7Z2T5 733 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 TRMT11Q7Z4G4 463 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MCOLN2Q8IZK6 566 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CENPLQ8N0S6 344 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF444Q8N0Y2 327 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF843Q8N446 348 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 RNF149Q8NC42 400 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ATP8B4Q8TF62 1192 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MITD1Q8WV92 249 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 BPIFA2Q96DR5 249 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 DUS3LQ96G46 650 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 THOC3Q96J01 351 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MARK4Q96L34 752 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 UBAC1Q9BSL1 405 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 NUP58Q9BVL2 599 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FUNDC2Q9BWH2 189 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 IL25Q9H293 177 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 OR51B6Q9H340 312 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF665Q9H7R5 613 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 TRIM45Q9H8W5 580 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SP140LQ9H930 580 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CALHM2Q9HA72 323 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZDHHC4Q9NPG8 344 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 GTSE1Q9NYZ3 720 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ERVK-18Q9QC07 812 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CYB5R1Q9UHQ9 305 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ENOPH1Q9UHY7 261 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SCML1Q9UN30 329 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 COX11Q9Y6N1 276 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 COLEC10Q9Y6Z7 277 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FRMPD4Q14CM0 1322 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 TRBV5-5A0A0J9YX44 114 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 GSTTP1A0A1W2PQM5 241 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 RAB19A4D1S5 217 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SRRM4A7MD48 611 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 NR5A2O00482 541 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CTSVO60911 334 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 TRIM3O75382 744 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CSDE1O75534 798 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 GLUD1P00367 558 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MT-ND2P03891 347 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CD3GP09693 182 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 TFPTP0C1Z6 253 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 GSTT2P0CG29 244 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 GSTT2BP0CG30 244 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 PPP2R1AP30153 589 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 KIR3DL2P43630 455 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CSNK1DP48730 415 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 GLUD2P49448 558 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CSNK1EP49674 416 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SSBP2P81877 361 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CNTN2Q02246 1040 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF33BQ06732 778 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CEACAM7Q14002 265 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 KEAP1Q14145 624 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ADPRMQ3LIE5 342 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MOGAT2Q3SYC2 334 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 WLSQ5T9L3 541 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ATF7IP2Q5U623 682 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 NCR3LG1Q68D85 454 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 DHRS11Q6UWP2 260 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CEACAM20Q6UY09 585 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FRA10AC1Q70Z53 315 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FAM122BQ7Z309 247 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 YRDCQ86U90 279 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 LRRC8AQ8IWT6 810 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MUC20Q8N307 709 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ARHGAP18Q8N392 663 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 KBTBD3Q8NAB2 608 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MLKLQ8NB16 471 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 OR5M1Q8NGP8 315 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 HTR3CQ8WXA8 447 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CACNG8Q8WXS5 425 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 PHYHIPQ92561 330 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 TOP1MTQ969P6 601 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 NXPE2Q96DL1 559 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 C4orf45Q96LM5 186 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms