RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SSC4DQ8WTU2 575 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 MRPL24Q96A35 216 aaKnown RBP2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 CLDN23Q96B33 292 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 MED8Q96G25 268 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 ALKBH3Q96Q83 286 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 SSX3Q99909 188 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 AGPAT1Q99943 283 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 PINK1Q9BXM7 581 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 PUS3Q9BZE2 481 aaKnown RBP2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 TRIM7Q9C029 511 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 TRIM6Q9C030 488 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 PARLQ9H300 379 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 MAGEF1Q9HAY2 307 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 PRR34Q9NV39 138 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 NDUFA13Q9P0J0 144 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 MAD2L2Q9UI95 211 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 PTPRQQ9UMZ3 2332 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 POLQO75417 2590 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 TET1Q8NFU7 2136 aa2.66□□□□□ -1.98
HMGB3P12-201ENST00000438745 ATAD5Q96QE3 1844 aa2.65□□□□□ -1.98
HMGB3P12-201ENST00000438745 NLRC5Q86WI3 1866 aa2.65□□□□□ -1.98
HMGB3P12-201ENST00000438745 TRGV8A0A0C4DH27 118 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 SYCE3A1L190 88 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 TRABD2BA6NFA1 517 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 ARHGEF33A8MVX0 844 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 DDX39AO00148 427 aaKnown RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 OGTO15294 1046 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 VEGFDO43915 354 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 RHOBTB1O94844 696 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR6A2O95222 327 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 PCP11498 1178 aaKnown RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 STIP1P31948 543 aaKnown RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 FCGR2BP31994 310 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 FCGR2CP31995 323 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 RPL9P32969 192 aaKnown RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 FHITP49789 147 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 HERV-K104P63124 156 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 CNTN2Q02246 1040 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 GABPAQ06546 454 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 PAX8Q06710 450 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 CBX3Q13185 183 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 PDE7AQ13946 482 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 STX1AQ16623 288 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZNF774Q6NX45 483 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 CDHR3Q6ZTQ4 885 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 CYP4V2Q6ZWL3 525 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 GET4Q7L5D6 327 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 TBC1D10CQ8IV04 446 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 CNTN4Q8IWV2 1026 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 PEX5LQ8IYB4 626 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR4L1Q8NH43 312 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 C8orf46Q8TAG6 207 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 PCNPQ8WW12 178 aaKnown RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZNF560Q96MR9 790 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 ANKRD27Q96NW4 1050 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 GAL3ST4Q96RP7 486 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 SOSTQ9BQB4 213 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZNF577Q9BSK1 485 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 CHCHD5Q9BSY4 110 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 FUNDC2Q9BWH2 189 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 NUSAP1Q9BXS6 441 aaKnown RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 STRADBQ9C0K7 418 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 WWP1Q9H0M0 922 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 CXXC4Q9H2H0 198 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 LIME1Q9H400 295 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZDHHC6Q9H6R6 413 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 DCLRE1BQ9H816 532 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 MARCH7Q9H992 704 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 GDF3Q9NR23 364 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 DDX28Q9NUL7 540 aaKnown RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 RAI14Q9P0K7 980 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 EPS15L1Q9UBC2 864 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 MRTO4Q9UKD2 239 aaKnown RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 FOXA2Q9Y261 457 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 DMXL2Q8TDJ6 3036 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 CLUHO75153 1309 aa2.65□□□□□ -1.99
HMGB3P12-201ENST00000438745 MYO10Q9HD67 2058 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 COL5A1P20908 1838 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 AKAP13Q12802 2813 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 IGLV4-3A0A075B6K6 122 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 IGLON5A6NGN9 336 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 CCDC69A6NI79 296 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 FBP2O00757 339 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 TRAFD1O14545 582 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 CDX4O14627 284 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 KIAA0513O60268 411 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 N4BP1O75113 896 aaKnown RBP2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 CXCL14O95715 111 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 PNPP00491 289 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 HPRP00739 348 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 GHRP10912 638 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 HLA-DPA1P20036 260 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 GLRA1P23415 457 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 ATP6V1E1P36543 226 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 ETV5P41161 510 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 PITPNBP48739 271 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 GEMP55040 296 aa2.64□□□□□ -1.99
HMGB3P12-201ENST00000438745 RPL27P61353 136 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms