RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 FXYD6P3P58550 94 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 TMEM174Q8WUU8 243 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 HLA-CQ95604 372 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 LINC00597Q9H2U6 94 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 CLCA1A8K7I4 914 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 SFTPBP07988 381 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 PTPRRQ15256 657 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 C22orf42Q6IC83 251 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF704Q6ZNC4 412 aaPredicted RBP15.01□□□□□ -0.01
PTPN13-204ENST00000436978 MARVELD2Q8N4S9 558 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 CCDC71LQ8N9Z2 235 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 APIPQ96GX9 242 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 CSNK1G1Q9HCP0 422 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 LOC102725191A0A1B0GVB3 256 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 C1orf105O95561 183 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 ICAM2P13598 275 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 CTXN1P60606 82 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 PXKQ7Z7A4 578 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 OR4N5Q8IXE1 308 aa15.01□□□□□ -0.01
PTPN13-204ENST00000436978 COL22A1Q8NFW1 1626 aaPredicted RBP15.01□□□□□ -0.01
PTPN13-204ENST00000436978 BCL7BQ9BQE9 202 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 MC3RP41968 323 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 GLO1Q04760 184 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 YPEL5P62699 121 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 LETMD1Q6P1Q0 360 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 SLC35F2Q8IXU6 374 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 OR7G3Q8NG95 312 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 CASTOR1Q8WTX7 329 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 NTMT1Q9BV86 223 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 MAB21L2Q9Y586 359 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 POLR2AP24928 1970 aaKnown RBP15□□□□□ -0.01
PTPN13-204ENST00000436978 MEIS3P2A8K0S8 358 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 RTCAO00442 366 aaKnown RBP15□□□□□ -0.01
PTPN13-204ENST00000436978 NDUFB2O95178 105 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 MYF6P23409 242 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 RBPJQ06330 500 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF252P-AS1Q0IIN9 211 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 SUN5Q8TC36 379 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 C16orf58Q96GQ5 468 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 TCTN2Q96GX1 697 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 CPNE7Q9UBL6 633 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 LAMP1P11279 417 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 MAP2K4P45985 399 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 CLSTN3Q9BQT9 956 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 SLC7A7Q9UM01 511 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 ENPP4Q9Y6X5 453 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 PYCR1P32322 319 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 FASLGP48023 281 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 PSPHP78330 225 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 VN1R2Q8NFZ6 395 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 OR5L1Q8NGL2 311 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 HHIPL1Q96JK4 782 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 ARL5BQ96KC2 179 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 KLHL15Q96M94 604 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 SFXN2Q96NB2 322 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 BTBD2Q9BX70 525 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 MARF1Q9Y4F3 1742 aaKnown RBP15□□□□□ -0.01
PTPN13-204ENST00000436978 SGK494L7N484 410 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 CKMT1AP12532 417 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 CD38P28907 300 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 ACVR1BP36896 505 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 SELENOWP63302 87 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 SIM1P81133 766 aaPredicted RBP15□□□□□ -0.01
PTPN13-204ENST00000436978 HSF5Q4G112 596 aaPredicted RBP15□□□□□ -0.01
PTPN13-204ENST00000436978 PRSS48Q7RTY5 328 aa15□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF761Q86XN6 746 aaPredicted RBP15□□□□□ -0.01
PTPN13-204ENST00000436978 MEGF11A6BM72 1044 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 B8ZZF3 427 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 G3V2L1 256 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 TIMP2P16035 220 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 SLC26A5P58743 744 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 LHFPL3Q86UP9 236 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 LMF2Q9BU23 707 aaKnown RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 TSPAN4O14817 238 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 SYT7O43581 403 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 IFNA1P01562 189 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 AGTR1P30556 359 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 KDELC1Q6UW63 502 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 PTHP01270 115 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 GRPRP30550 384 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 SIX1Q15475 284 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 EIF2S3LQ2VIR3 472 aaKnown RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 DEFB133Q30KQ1 61 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 FAM182AQ5T1J6 154 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 SLC22A10Q63ZE4 541 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 MSLNLQ96KJ4 702 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 TMEM68Q96MH6 324 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 VRK1Q99986 396 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 CCDC32Q9BV29 185 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 GPN2Q9H9Y4 310 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 ZFP57Q9NU63 452 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 DENRO43583 198 aaKnown RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 DCAF7P61962 342 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 NTHL1P78549 312 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF765Q7L2R6 523 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 OR52E1Q8NGJ3 308 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 MFSD8Q8NHS3 518 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 MAL2Q969L2 176 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 INPP5KQ9BT40 448 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms