RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 WWP2O00308 870 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 AP3D1O14617 1153 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 FCMRO60667 390 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 SMIM10L1P0DMW3 83 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 MAGP20916 626 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 DEFA1P59665 94 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 DEFA3P59666 94 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 DECR1Q16698 335 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 C6orf132Q5T0Z8 1188 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 FBXO42Q6P3S6 717 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 PLEKHM3Q6ZWE6 761 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 TRIM73Q86UV7 250 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 SLC16A11Q8NCK7 471 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 SMIM10Q96HG1 83 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 ISYNA1Q9NPH2 558 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 IQCMA0A1B0GVH7 501 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 H0Y8X5 98 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 STK25O00506 426 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 TNFSF14O43557 240 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 OR5F1O95221 314 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 KLF8O95600 359 aaPredicted RBP17.37■□□□□ 0.37
CLK1-205ENST00000434813 TNFSF8P32971 234 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 ACTR1BP42025 376 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 ACTR1AP61163 376 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 TCEA2Q15560 299 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 RRM2BQ7LG56 351 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 ANKK1Q8NFD2 765 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 CCL4L1Q8NHW4 92 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 CDS1Q92903 461 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 SIPA1Q96FS4 1042 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 WDFY2Q96P53 400 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 OR2A14Q96R47 310 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 NELL2Q99435 816 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 PAIP2BQ9ULR5 123 aaKnown RBP17.37■□□□□ 0.37
CLK1-205ENST00000434813 CA5BQ9Y2D0 317 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 EXOSC1Q9Y3B2 195 aaKnown RBP17.37■□□□□ 0.37
CLK1-205ENST00000434813 H3BQ06 376 aaPredicted RBP17.37■□□□□ 0.37
CLK1-205ENST00000434813 P2RX6O15547 441 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 KLF4O43474 513 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 KCNK2O95069 426 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 APBB3O95704 486 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 IL1AP01583 271 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 STAT5AP42229 794 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 MTNR1AP48039 350 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 PUS10Q3MIT2 529 aaKnown RBP17.37■□□□□ 0.37
CLK1-205ENST00000434813 FLYWCH1Q4VC44 716 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 PRRT3Q5FWE3 981 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 GALNT6Q8NCL4 622 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 TOR1AIP2Q8NFQ8 470 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 OR4K14Q8NGD5 310 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 ZCCHC10Q8TBK6 192 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 SLC9A6Q92581 669 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 HPS1Q92902 700 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 TXNDC15Q96J42 360 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 MCHR1Q99705 422 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 MTHFD2LQ9H903 347 aaPredicted RBP17.37■□□□□ 0.37
CLK1-205ENST00000434813 SNTG1Q9NSN8 517 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 TXNL4BQ9NX01 149 aaKnown RBP17.37■□□□□ 0.37
CLK1-205ENST00000434813 PTGFRNQ9P2B2 879 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 DAPP1Q9UN19 280 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 NCKAP1Q9Y2A7 1128 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 CARD8Q9Y2G2 431 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 GPR52Q9Y2T5 361 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 PIAS3Q9Y6X2 628 aa17.37■□□□□ 0.37
CLK1-205ENST00000434813 SLC35F4A4IF30 521 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 URADA6NGE7 173 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 B3GALT2O43825 422 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 CTSVO60911 334 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 NTN1O95631 604 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 EGFP01133 1207 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 THY1P04216 161 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 SPNP16150 400 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 UGT2B7P16662 529 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 MAP4K2Q12851 820 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 COL19A1Q14993 1142 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 TMEM44Q2T9K0 475 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 ARHGAP11BQ3KRB8 267 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 TYW3Q6IPR3 259 aaKnown RBP17.36■□□□□ 0.37
CLK1-205ENST00000434813 RD3Q7Z3Z2 195 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 GDF7Q7Z4P5 450 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 NKAIN4Q8IVV8 208 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 OSTF1Q92882 214 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 TSACCQ96A04 125 aaPredicted RBP17.36■□□□□ 0.37
CLK1-205ENST00000434813 SLC41A3Q96GZ6 507 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 TTYH1Q9H313 450 aaPredicted RBP17.36■□□□□ 0.37
CLK1-205ENST00000434813 WDR45Q9Y484 360 aa17.36■□□□□ 0.37
CLK1-205ENST00000434813 SPIN1Q9Y657 262 aaPredicted RBP17.36■□□□□ 0.37
CLK1-205ENST00000434813 ATP6V1G1O75348 118 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 TSPAN19P0C672 248 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 GNSP15586 552 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 COPZ1P61923 177 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 PSPHP78330 225 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 RUNX1T1Q06455 604 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 DEFB134Q4QY38 66 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 FCRL6Q6DN72 434 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 ZNF836Q6ZNA1 936 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 MBOAT2Q6ZWT7 520 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 USP53Q70EK8 1073 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 LAPTM4BQ86VI4 370 aa17.35■□□□□ 0.37
CLK1-205ENST00000434813 PEX5LQ8IYB4 626 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms