RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SLC35F4A4IF30 521 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 C1QTNF3-AMACRE9PGA6 284 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PPP1R2P9O14990 202 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 RAD17O75943 681 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 OR2J3O76001 311 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 T-ENOLP0DO92 83 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 IL7RP16871 459 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 GJA4P35212 333 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PMELP40967 661 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PPT1P50897 306 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 TLE1Q04724 770 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 TATDN3Q17R31 274 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 GOLGA7BQ2TAP0 167 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 REP15Q6BDI9 236 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 HSD17B11Q8NBQ5 300 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PDPRQ8NCN5 879 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 OR1L6Q8NGR2 347 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PIGXQ8TBF5 258 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SPSB1Q96BD6 273 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 S100A13Q99584 98 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PLEKHA2Q9HB19 425 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 DCP1AQ9NPI6 582 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 LPAR3Q9UBY5 353 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 LSM5Q9Y4Y9 91 aaKnown RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ORC6Q9Y5N6 252 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CSNK1G3Q9Y6M4 447 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CFAP43Q8NDM7 1665 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 RAPGEF2Q9Y4G8 1499 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CCDC187A0A096LP49 1063 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 A0A1W2PRU2 124 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 FAM74A7A6NL05 159 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF850A8MQ14 1090 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CLIC1O00299 241 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PDHXO00330 501 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PAGE1O75459 146 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 GLSO94925 669 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 OAS1P00973 400 aaKnown RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 OR10J4P0C629 311 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 DAOP14920 347 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PNLIPP16233 465 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 TAC1P20366 129 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 FPR1P21462 350 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 HOXA13P31271 388 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 GRK5P34947 590 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ASPAP45381 313 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 RORCP51449 518 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CD81P60033 236 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SEC61GP60059 68 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 TFAMQ00059 246 aaKnown RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CHRFAM7AQ494W8 412 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 FAM74A3Q4VXF1 159 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 GTF2H5Q6ZYL4 71 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PTAR1Q7Z6K3 402 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 MYPOPQ86VE0 399 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 IRF2BP1Q8IU81 584 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ENTHD1Q8IYW4 607 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM102Q8N9M5 508 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 RBM15BQ8NDT2 890 aaKnown RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 OR51S1Q8NGJ8 323 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SLC2A12Q8TD20 617 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 RHBDD1Q8TEB9 315 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 BCL2L2Q92843 193 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 GGACTQ9BVM4 153 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 RNF26Q9BY78 433 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 NKX6-2Q9C056 277 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SLC28A3Q9HAS3 691 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 BFARQ9NZS9 450 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 MSRAQ9UJ68 235 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 IKZF3Q9UKT9 509 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PLB1Q6P1J6 1458 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 FYCO1Q9BQS8 1478 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ADGRA3Q8IWK6 1321 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CDRT15L2A8MXV6 281 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 MCIDASD6RGH6 385 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 IFNL4K9M1U5 179 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CAPN5O15484 640 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SOX30O94993 753 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ANXA1P04083 346 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SERPINA5P05154 406 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 C4BPBP20851 252 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 FGF7P21781 194 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 GPR12P47775 334 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 UBE2MP61081 183 aaKnown RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 ARHGAP1Q07960 439 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SMAGPQ0VAQ4 97 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SGCBQ16585 318 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SMIM21Q3B7S5 101 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 EIPR1Q53HC9 387 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CATSPEREQ5SY80 951 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 LDLRAD2Q5SZI1 272 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 FAM199XQ6PEV8 388 aaPredicted RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 PODNL1Q6PEZ8 512 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 LINC00301Q8NCQ3 95 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 DBF4BQ8NFT6 615 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 OR7A2PQ8NGA2 310 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 OR5B17Q8NGF7 314 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 OR10D4PQ8NGN7 298 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 CELF6Q96J87 481 aaKnown RBP5.06□□□□□ -1.6
PTPN4-203ENST00000430976 SLC46A1Q96NT5 459 aa5.06□□□□□ -1.6
PTPN4-203ENST00000430976 URM1Q9BTM9 101 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms