RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 GUSBP08236 651 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 T-ENOLP0DO92 83 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 NR2F1P10589 423 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 HLCSP50747 726 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 PNLIPRP2P54317 469 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 EEFSECP57772 596 aaKnown RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 SLC25A3Q00325 362 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 KCNAB2Q13303 367 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 TUBA3CQ13748 450 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 NTRK2Q16620 822 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 COL28A1Q2UY09 1125 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 SPATS1Q496A3 300 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 SAMD4BQ5PRF9 694 aaKnown RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 PRAMEF8Q5VWM4 474 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 PRAMEF7Q5VXH5 474 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 TUBA3EQ6PEY2 450 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 IGFL2Q6UWQ7 119 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 LYPD8Q6UX82 237 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 C16orf47Q6ZP98 133 aaPredicted RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 NET1Q7Z628 596 aaPredicted RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 DEFB107AQ8IZN7 70 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 ARHGAP24Q8N264 748 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 GOLM1Q8NBJ4 401 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 FAM13CQ8NE31 585 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 OR2T12Q8NG77 320 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 OR4N2Q8NGD1 307 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 OR10A6Q8NH74 314 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 C9orf43Q8TAL5 461 aaPredicted RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 BBS10Q8TAM1 723 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 OIT3Q8WWZ8 545 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 EFHD2Q96C19 240 aaPredicted RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 TMCO6Q96DC7 493 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 CRELD1Q96HD1 420 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 REXO5Q96IC2 774 aaKnown RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 SGCZQ96LD1 299 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 COL21A1Q96P44 957 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 TRNT1Q96Q11 434 aaKnown RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 SECISBP2Q96T21 854 aaKnown RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 TRIM8Q9BZR9 551 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 ALG2Q9H553 416 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 TRIM45Q9H8W5 580 aaPredicted RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 ADA2Q9NZK5 511 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 PRPF19Q9UMS4 504 aaKnown RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 WDR45Q9Y484 360 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 PCDHGA10Q9Y5H3 936 aa10.14□□□□□ -0.79
CHD4-202ENST00000430771 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.14□□□□□ -0.79
CHD4-202ENST00000430771 ZFHX4Q86UP3 3567 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 ERVH48-1M5A8F1 160 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 NME4O00746 187 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 GYG2O15488 501 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 KIAA0513O60268 411 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 TSPAN2O60636 221 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 DPM1O60762 260 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 WDPCPO95876 746 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 C1QCP02747 245 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 NUDT7P0C024 238 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 PCGF2P35227 344 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 CDK6Q00534 326 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 FUT5Q11128 374 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 SCARB2Q14108 478 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 OR1C1Q15619 314 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 FLYWCH1Q4VC44 716 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 LACTB2Q53H82 288 aaPredicted RBP10.13□□□□□ -0.79
CHD4-202ENST00000430771 TBCELQ5QJ74 424 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 CCNJQ5T5M9 372 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 INTS11Q5TA45 600 aaKnown RBP10.13□□□□□ -0.79
CHD4-202ENST00000430771 FIGNL1Q6PIW4 674 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 C19orf48Q6RUI8 117 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 IL20RBQ6UXL0 311 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 LRRC74BQ6ZQY2 392 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 RINLQ6ZS11 566 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 NUP54Q7Z3B4 507 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 SLC15A3Q8IY34 581 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 ZNF619Q8N2I2 560 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 ZADH2Q8N4Q0 377 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 ZNF527Q8NB42 609 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 HIPK4Q8NE63 616 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 FBXO27Q8NI29 283 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 FAM110BQ8TC76 370 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 TTC9Q92623 222 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 TMEM19Q96HH6 336 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 C5orf34Q96MH7 638 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 ADOQ96SZ5 270 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 KCTD14Q9BQ13 255 aaPredicted RBP10.13□□□□□ -0.79
CHD4-202ENST00000430771 HOXD1Q9GZZ0 328 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.13□□□□□ -0.79
CHD4-202ENST00000430771 HHATLQ9HCP6 504 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 TIMMDC1Q9NPL8 285 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 CMTM6Q9NX76 183 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 LRFN1Q9P244 771 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 TMEM181Q9P2C4 612 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 ABCG2Q9UNQ0 655 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 KCNE3Q9Y6H6 103 aa10.13□□□□□ -0.79
CHD4-202ENST00000430771 ZZEF1O43149 2961 aa10.12□□□□□ -0.79
CHD4-202ENST00000430771 USP24Q9UPU5 2620 aa10.12□□□□□ -0.79
CHD4-202ENST00000430771 TRAV17A0A0B4J275 112 aa10.12□□□□□ -0.79
CHD4-202ENST00000430771 PRAMEF25A6NGN4 478 aa10.12□□□□□ -0.79
CHD4-202ENST00000430771 SCDO00767 359 aa10.12□□□□□ -0.79
CHD4-202ENST00000430771 ZNF354AO60765 605 aaPredicted RBP10.12□□□□□ -0.79
CHD4-202ENST00000430771 ICOSLGO75144 302 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms