RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ZNF7P17097 686 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 PSMB1P20618 241 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 PCSK1P29120 753 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 GIPRP48546 466 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 KCNJ3P48549 501 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 DCDP81605 110 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 CDK5Q00535 292 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 BDH1Q02338 343 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 SIGLEC14Q08ET2 396 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 INSL4Q14641 139 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 SF1Q15637 639 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 MS4A13Q5J8X5 152 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 SFXN4Q6P4A7 337 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 TPRA1Q86W33 373 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ZBTB2Q8N680 514 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 POGLUT1Q8NBL1 392 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 OR51Q1Q8NH59 317 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 TRMT10AQ8TBZ6 339 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 LPPQ93052 612 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 PNPLA2Q96AD5 504 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 CMSS1Q9BQ75 279 aaKnown RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ANKRD19PQ9H560 264 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF334Q9HCZ1 680 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-206ENST00000428313 CPA4Q9UI42 421 aa15.14■□□□□ 0.01
C9orf3-206ENST00000428313 A0A1B0GVC2 190 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 A6NIN4 97 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 DISC1C4P0D8 188 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 CACNB4O00305 520 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-206ENST00000428313 APBA3O96018 575 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 IDSP22304 550 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SMIM11AP58511 58 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 MBOAT1Q6ZNC8 495 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SLC16A13Q7RTY0 426 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SPAG16Q8N0X2 631 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 OR10K1Q8NGX5 313 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 TSNAXQ99598 290 aaKnown RBP15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SLC35A5Q9BS91 424 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 FUZQ9BT04 418 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 BTBD1Q9H0C5 482 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 TMEM161AQ9NX61 479 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 PTGFRNQ9P2B2 879 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 GULP1Q9UBP9 304 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SNRPGP15A8MWD9 76 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 KDM4EB2RXH2 506 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SCAMP1O15126 338 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 IGHV2-70P01814 119 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 ACADLP28330 430 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 CTSCP53634 463 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 RING1Q06587 406 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 IRF5Q13568 498 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SNTB1Q13884 538 aaKnown RBP15.13■□□□□ 0.01
C9orf3-206ENST00000428313 TMEM255AQ5JRV8 349 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 ELP2Q6IA86 826 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 ACSM5Q6NUN0 579 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 ZNF852Q6ZMS4 543 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SKA3Q8IX90 412 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 PUSL1Q8N0Z8 303 aaKnown RBP15.13■□□□□ 0.01
C9orf3-206ENST00000428313 MEIOBQ8N635 442 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 SCAMP5Q8TAC9 235 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 LKAAEAR1Q8TD35 194 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 CXorf40BQ96DE9 158 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 TCEAL7Q9BRU2 100 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 GPN1Q9HCN4 374 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-206ENST00000428313 BPIFA1Q9NP55 256 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 NIT2Q9NQR4 276 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 RASL12Q9NYN1 266 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 NKIRAS2Q9NYR9 191 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 VPS29Q9UBQ0 182 aa15.13■□□□□ 0.01
C9orf3-206ENST00000428313 NEDD8-MDP1E9PL57 170 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 HYAL3O43820 417 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 TSPAN3O60637 253 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 UBBP0CG47 229 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 UBCP0CG48 685 aaKnown RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 ACVRL1P37023 503 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 RPS27AP62979 156 aaKnown RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 UBA52P62987 128 aaKnown RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 MAT1AQ00266 395 aaKnown RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 E2F1Q01094 437 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 SMARCD3Q6STE5 483 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 LRRN1Q6UXK5 716 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 USP53Q70EK8 1073 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 LHFPL3Q86UP9 236 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 LRRC56Q8IYG6 542 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 SMIM4Q8WVI0 70 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 KLRG1Q96E93 195 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 BBS4Q96RK4 519 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 BHLHE41Q9C0J9 482 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 FBXW2Q9UKT8 454 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 PTPRDP23468 1912 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 RNF13O43567 381 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 CREBL2O60519 120 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 SLC25A27O95847 323 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 IL5P05113 134 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 PRF1P14222 555 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 STARP49675 285 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 RNF144AP50876 292 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 TNFRSF17Q02223 184 aa15.12■□□□□ 0.01
C9orf3-206ENST00000428313 MLLT1Q03111 559 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-206ENST00000428313 ACSM2AQ08AH3 577 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms