RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 GPALPP1Q8IXQ4 340 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 PRR22Q8IZ63 422 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 TAGAPQ8N103 731 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 ZNF843Q8N446 348 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 TMEM156Q8N614 296 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 OR4N2Q8NGD1 307 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 OR4A15Q8NGL6 344 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 SLC22A8Q8TCC7 542 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 SFXN5Q8TD22 340 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 ASB15Q8WXK1 588 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 GTF2H4Q92759 462 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 PNPLA2Q96AD5 504 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 NTNG2Q96CW9 530 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 HSPBAP1Q96EW2 488 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 SLC35A4Q96G79 324 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 SCMH1Q96GD3 660 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 LMF2Q9BU23 707 aaKnown RBP6.82□□□□□ -1.32
LINC01049-201ENST00000426840 HES7Q9BYE0 225 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.82□□□□□ -1.32
LINC01049-201ENST00000426840 C12orf49Q9H741 205 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 SH2D2AQ9NP31 389 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 SLC6A13Q9NSD5 602 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 ZCCHC3Q9NUD5 404 aaKnown RBP6.82□□□□□ -1.32
LINC01049-201ENST00000426840 GPATCH2Q9NW75 528 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 ANAPC2Q9UJX6 822 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 ADAM21Q9UKJ8 722 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 PCDHGB4Q9UN71 923 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 HIF3AQ9Y2N7 669 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 PCDHGB6Q9Y5F9 930 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 SNX8Q9Y5X2 465 aa6.82□□□□□ -1.32
LINC01049-201ENST00000426840 NINQ8N4C6 2090 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ITPR1Q14643 2758 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 TLN1Q9Y490 2541 aaKnown RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 TRAV17A0A0B4J275 112 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 A0A1W2PP18 115 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 GXYLT2A0PJZ3 443 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 FRG2CA6NGY1 282 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 TTC36A6NLP5 189 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 A8MVJ9 347 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ACOX3O15254 700 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SUV39H1O43463 412 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SHOX2O60902 331 aaPredicted RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SORBS2O94875 1100 aaKnown RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 GSNP06396 782 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ZCCHC18P0CG32 403 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 HOXB9P17482 250 aaPredicted RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 CAPN3P20807 821 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 CNR1P21554 472 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ADSLP30566 484 aaPredicted RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 GABRA3P34903 492 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 CASRP41180 1078 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 TRPC1P48995 793 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 PRIM2P49643 509 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 KCNK10P57789 538 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 PRR5P85299 388 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 LRRC74AQ0VAA2 488 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 KLF10Q13118 480 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 RCAN2Q14206 197 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 LASP1Q14847 261 aaKnown RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ZNF169Q14929 603 aaPredicted RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 NNATQ16517 81 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 NTRK2Q16620 822 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 MAPKAPK3Q16644 382 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 DUSP5Q16690 384 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 CYP27C1Q4G0S4 372 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 TIGD2Q4W5G0 525 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ZNF766Q5HY98 468 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 PAGE3Q5JUK9 113 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SAXO2Q658L1 398 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 CDC73Q6P1J9 531 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SLC2A7Q6PXP3 512 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 RTL4Q6ZR62 310 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 GK5Q6ZS86 529 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ZNF621Q6ZSS3 439 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 NUP54Q7Z3B4 507 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 CYP4Z2PQ8N1L4 340 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 CDRT4Q8N9R6 151 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SLC16A11Q8NCK7 471 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 OR56A1Q8NGH5 318 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 OR5AK3PQ8NH89 298 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 FAM110BQ8TC76 370 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 PAQR8Q8TEZ7 354 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 TSPEARQ8WU66 669 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 HGDQ93099 445 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 TMBIM1Q969X1 311 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 MOAP1Q96BY2 351 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SPACA9Q96E40 222 aaPredicted RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 OMA1Q96E52 524 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SPDL1Q96EA4 605 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ITCHQ96J02 903 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 SGCZQ96LD1 299 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 MS4A4EQ96PG1 132 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 PANX1Q96RD7 426 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 CCT8L2Q96SF2 557 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 YIPF4Q9BSR8 244 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 ACTRT3Q9BYD9 372 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 PAIP1Q9H074 479 aaKnown RBP6.81□□□□□ -1.32
LINC01049-201ENST00000426840 FAM107BQ9H098 131 aa6.81□□□□□ -1.32
LINC01049-201ENST00000426840 EPN3Q9H201 632 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms