RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 H2AFB1P0C5Y9 115 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 DRD2P14416 443 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SNRPBP14678 240 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 RAB3BP20337 219 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC6A11P48066 632 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC11A2P49281 568 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SNTB2Q13425 540 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 MZT2AQ6P582 158 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 TRMT11Q7Z4G4 463 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 ZER1Q7Z7L7 766 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 RNF180Q86T96 592 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 TRPV1Q8NER1 839 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 GPR32P1Q8NGA4 272 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 RPLP0P6Q8NHW5 317 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 ARMC5Q96C12 935 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 CMSS1Q9BQ75 279 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 FXYD6Q9H0Q3 95 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SGK2Q9HBY8 427 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 GKN1Q9NS71 199 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SCP2D1Q9UJQ7 156 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 EDARQ9UNE0 448 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 OR10H1Q9Y4A9 318 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 PTPRDP23468 1912 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 MAGEB4O15481 346 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 CXCL14O95715 111 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 TACR2P21452 398 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 KCNJ3P48549 501 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 STXBP1P61764 594 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 HTRA3P83110 453 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 CAP1Q01518 475 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 GPR33Q49SQ1 333 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SPIN4Q56A73 249 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 MPP7Q5T2T1 576 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 PODNL1Q6PEZ8 512 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 CBLN2Q8IUK8 224 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 FBXO32Q969P5 355 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC25A28Q96A46 364 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 MED18Q9BUE0 208 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 FAIM2Q9BWQ8 316 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 QRSL1Q9H0R6 528 aaKnown RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 ABCG4Q9H172 646 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 ZSCAN32Q9NX65 697 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 ACTR10Q9NZ32 417 aa10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 CXXC1Q9P0U4 656 aaPredicted RBP10.62□□□□□ -0.71
SEC61A1-202ENST00000424880 DSPPQ9NZW4 1301 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 PATJQ8NI35 1801 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 MANSC4A6NHS7 340 aaPredicted RBP10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 FZD7O75084 574 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 SULT1A3P0DMM9 295 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 SULT1A4P0DMN0 295 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 ANXA7P20073 488 aaKnown RBP10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 ACVR1BP36896 505 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 MMP12P39900 470 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC1A3P43003 542 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 RAD52P43351 418 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 RPS13P62277 151 aaKnown RBP10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC3A1Q07837 685 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 HYAL4Q2M3T9 481 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 DEFB115Q30KQ5 88 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 VASNQ6EMK4 673 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 ARL9Q6T311 187 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 MON1AQ86VX9 555 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 KRT78Q8N1N4 520 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 C2orf73Q8N5S3 287 aaPredicted RBP10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 BVESQ8NE79 360 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 TRMT10AQ8TBZ6 339 aaKnown RBP10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 KLK6Q92876 244 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 FBXO17Q96EF6 278 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 FCRL4Q96PJ5 515 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC38A3Q99624 504 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 ARHGAP9Q9BRR9 750 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 TDP1Q9NUW8 608 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 TEX10Q9NXF1 929 aaPredicted RBP10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 RALGAPA2Q2PPJ7 1873 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 SMIM35A0A1B0GVV1 85 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC9B1P1A6NJY1 282 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 MPTX1A8MV57 137 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 F5H5T6 163 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 ADRB1P08588 477 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 ACSL1P33121 698 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 HTR4Q13639 388 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 TPBGQ13641 420 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 C12orf73Q69YU5 71 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 LILRA3Q8N6C8 439 aaPredicted RBP10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 ARIH2OSQ8N7S6 290 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 OR51G2Q8NGK0 314 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 HHIPQ96QV1 700 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 OR1F2PQ96R84 312 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 MNTQ99583 582 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 SEMA4CQ9C0C4 833 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 KCNK12Q9HB15 430 aa10.61□□□□□ -0.71
SEC61A1-202ENST00000424880 C5orf58C9J3I9 102 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 GPR31O00270 319 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 ARPC1BO15143 372 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 H1F0P07305 194 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 TYMPP19971 482 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 PSEN2P49810 448 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 MEOX2P50222 304 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC16A1P53985 500 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms