RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PRODH2Q9UF12 536 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 TAF4O00268 1085 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 OR1E2P47887 323 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 CCL11P51671 97 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 BIKQ13323 160 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 TYW3Q6IPR3 259 aaKnown RBP12.4□□□□□ -0.42
PRPF39-202ENST00000424478 FRRS1Q6ZNA5 592 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 PSMF1Q92530 271 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 TAMM41Q96BW9 452 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 ART5Q96L15 291 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 BTBD9Q96Q07 612 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 PLA2G3Q9NZ20 509 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 CORO2BQ9UQ03 480 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 WDR45Q9Y484 360 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 SNX13Q9Y5W8 968 aa12.4□□□□□ -0.42
PRPF39-202ENST00000424478 ZFAND5O76080 213 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 HPP00738 406 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 SOX3P41225 446 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 PPICP45877 212 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 HOXC5Q00444 222 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 PLCXD2Q0VAA5 305 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 DUSP7Q16829 419 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 EXOSC6Q5RKV6 272 aaKnown RBP12.39□□□□□ -0.43
PRPF39-202ENST00000424478 IL20RBQ6UXL0 311 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 NET1Q7Z628 596 aaPredicted RBP12.39□□□□□ -0.43
PRPF39-202ENST00000424478 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 MIPOL1Q8TD10 442 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 PYDC1Q8WXC3 89 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 RELTQ969Z4 430 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 ASB9Q96DX5 294 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 OMA1Q96E52 524 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 KLHDC3Q9BQ90 382 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 ING2Q9H160 280 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 UGT2B11O75310 529 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 OR6B1O95007 311 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 IGHEP01854 428 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 CD63P08962 238 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 HTR1EP28566 365 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 OR5M10Q6IEU7 315 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 REEP3Q6NUK4 255 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 ZNF441Q8N8Z8 693 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 RASL10BQ96S79 203 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 A4GALTQ9NPC4 353 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 DUSP22Q9NRW4 184 aa12.39□□□□□ -0.43
PRPF39-202ENST00000424478 SUCOQ9UBS9 1254 aaKnown RBP12.39□□□□□ -0.43
PRPF39-202ENST00000424478 RRP15Q9Y3B9 282 aaKnown RBP12.39□□□□□ -0.43
PRPF39-202ENST00000424478 ICOSLGO75144 302 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 SLITRK5O94991 958 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 BMP2P12643 396 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 PCGF2P35227 344 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 PIGAP37287 484 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 CDC20Q12834 499 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 FLYWCH1Q4VC44 716 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 HEPHL1Q6MZM0 1159 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 APOOLQ6UXV4 268 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 NACC2Q96BF6 587 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 BTBD2Q9BX70 525 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 TMEM38AQ9H6F2 299 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 MMP25Q9NPA2 562 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 CTPS2Q9NRF8 586 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 EXD2Q9NVH0 621 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 PPIEQ9UNP9 301 aaKnown RBP12.38□□□□□ -0.43
PRPF39-202ENST00000424478 HEATR5AQ86XA9 2040 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 H0Y3Z8 333 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 CIB2O75838 187 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 PRKD3O94806 890 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 FUT4P22083 530 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 KDELR2P33947 212 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 YAP1P46937 504 aaKnown RBP12.38□□□□□ -0.43
PRPF39-202ENST00000424478 HPCAP84074 193 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 KCNAB2Q13303 367 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 INPP5JQ15735 1006 aaPredicted RBP12.38□□□□□ -0.43
PRPF39-202ENST00000424478 EXT1Q16394 746 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 PDZK1Q5T2W1 519 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 SLC26A7Q8TE54 656 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 RAD21L1Q9H4I0 556 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 AURKCQ9UQB9 309 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 TMEM229AB2RXF0 380 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 BCAS2O75934 225 aaPredicted RBP12.38□□□□□ -0.43
PRPF39-202ENST00000424478 DIRAS1O95057 198 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 NADKO95544 446 aaPredicted RBP12.38□□□□□ -0.43
PRPF39-202ENST00000424478 ARHGAP11BQ3KRB8 267 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 PRAMEF20Q5VT98 475 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 RPS19BP1Q86WX3 136 aaKnown RBP12.38□□□□□ -0.43
PRPF39-202ENST00000424478 RBM45Q8IUH3 476 aaKnown RBP12.38□□□□□ -0.43
PRPF39-202ENST00000424478 CLEC1AQ8NC01 280 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 OR10G3Q8NGC4 313 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 RAB3IPQ96QF0 476 aaPredicted RBP12.38□□□□□ -0.43
PRPF39-202ENST00000424478 GALNT9Q9HCQ5 603 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 SH3GLB1Q9Y371 365 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 HRH3Q9Y5N1 445 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 CSAG2Q9Y5P2 127 aa12.38□□□□□ -0.43
PRPF39-202ENST00000424478 EXPH5Q8NEV8 1989 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 FRG2CA6NGY1 282 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 DUXAA6NLW8 204 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 CYP7B1O75881 506 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 PTNP21246 168 aa12.37□□□□□ -0.43
PRPF39-202ENST00000424478 TRHRP34981 398 aaPredicted RBP12.37□□□□□ -0.43
PRPF39-202ENST00000424478 CRISP3P54108 245 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms