RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 HSPB2Q16082 182 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 NOXRED1Q6NXP6 359 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 LARP4Q71RC2 724 aaKnown RBP eCLIP13.82□□□□□ -0.2
USB1-202ENST00000423271 CDH24Q86UP0 819 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 LACC1Q8IV20 430 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 PM20D2Q8IYS1 436 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 FAM76AQ8TAV0 307 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 RAB3IL1Q8TBN0 382 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 RNF138Q8WVD3 245 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 TMCO6Q96DC7 493 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 EGLN2Q96KS0 407 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 OR2B2Q9GZK3 357 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 GLIPR2Q9H4G4 154 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 MANSC1Q9H8J5 431 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 FBXL2Q9UKC9 423 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.82□□□□□ -0.2
USB1-202ENST00000423271 WIF1Q9Y5W5 379 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 AKAP6Q13023 2319 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 NPIPB8E9PQR5 432 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 POU3F2P20265 443 aaPredicted RBP13.81□□□□□ -0.2
USB1-202ENST00000423271 PRPH2P23942 346 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 IL12BP29460 328 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 NTSP30990 170 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 KRT20P35900 424 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 ZNF136P52737 540 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 PSG6Q00889 435 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 MYBPHQ13203 477 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 EFR3AQ14156 821 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 XKR7Q5GH72 579 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 NSUN5P2Q63ZY6 315 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 ATG16L1Q676U5 607 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 OR5M10Q6IEU7 315 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 ANKRD26P1Q6NSI1 321 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 POMZP3Q6PJE2 187 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 PLCZ1Q86YW0 608 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 TRIM42Q8IWZ5 723 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 HOMEZQ8IX15 550 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 OR14L1PQ8NHC6 308 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 GFM2Q969S9 779 aaKnown RBP13.81□□□□□ -0.2
USB1-202ENST00000423271 C3orf30Q96M34 536 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 AMDHD1Q96NU7 426 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 TRIB1Q96RU8 372 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 ZNF559Q9BR84 538 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 LRTM1Q9HBL6 345 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 PNPOQ9NVS9 261 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 C1orf109Q9NX04 203 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 TAS2R9Q9NYW1 312 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 TAS2R7Q9NYW3 318 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 GIMAP2Q9UG22 337 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 KCNN3Q9UGI6 736 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 HAO1Q9UJM8 370 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
USB1-202ENST00000423271 A0A087WV62 115 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 UPK1AO00322 258 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 LSM1O15116 133 aaKnown RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 COQ9O75208 318 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 SNNO75324 88 aaPredicted RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 SEC22BO75396 215 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 CBR3O75828 277 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 SNUPNO95149 360 aaKnown RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 PSMG1O95456 288 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 CYP4B1P13584 511 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 CAPN3P20807 821 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 TCEA1P23193 301 aaKnown RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 TIMP3P35625 211 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 RPL14P50914 215 aaKnown RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 GAS1P54826 345 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 PDCD2Q16342 344 aaPredicted RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 PLXDC2Q6UX71 529 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 IKBIPQ70UQ0 350 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 OR2L13Q8N349 312 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 ZNF75CPQ92670 426 aaPredicted RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 DDX18Q9NVP1 670 aaKnown RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 THAP1Q9NVV9 213 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 FLRT3Q9NZU0 649 aa13.8□□□□□ -0.2
USB1-202ENST00000423271 C19orf53Q9UNZ5 99 aaPredicted RBP13.8□□□□□ -0.2
USB1-202ENST00000423271 HIVEP1P15822 2718 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 MBD3L4A6NDZ8 208 aaPredicted RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 MBD3L3A6NE82 208 aaPredicted RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 MBD3L5A6NJ08 208 aaPredicted RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 CD8B2A6NJW9 211 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 PLOD2O00469 737 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 DVL2O14641 736 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 SCO2O43819 266 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 ACTL6AO96019 429 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 IL2RAP01589 272 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 SDC1P18827 310 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 UQCRC1P31930 480 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 STARP49675 285 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 ASCL1P50553 236 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 AGFG1P52594 562 aaKnown RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 PNLIPRP2P54317 469 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 GFRA1P56159 465 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 RPL38P63173 70 aaKnown RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 OCRLQ01968 901 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 GALNTL6Q49A17 601 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 ZNF385BQ569K4 471 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 ARSKQ6UWY0 536 aa13.79□□□□□ -0.2
USB1-202ENST00000423271 ZNF551Q7Z340 670 aaPredicted RBP13.79□□□□□ -0.2
USB1-202ENST00000423271 TMEM200AQ86VY9 491 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms