RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 OR10H2O60403 315 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 PRG2P13727 222 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 CPMP14384 443 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 GNSP15586 552 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 GTF2E2P29084 291 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 PCYT1AP49585 367 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 MAZP56270 477 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 ZNF404Q494X3 552 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SMUG1Q53HV7 270 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SLC35F1Q5T1Q4 408 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SLX4IPQ5VYV7 408 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 TYW3Q6IPR3 259 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 HSDL2Q6YN16 418 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 PEX5LQ8IYB4 626 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 AMER2Q8N7J2 671 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SERINC2Q96SA4 455 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 PINK1Q9BXM7 581 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SLIRPQ9GZT3 109 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 SAP130Q9H0E3 1048 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 TRNAU1APQ9NX07 287 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 KCMF1Q9P0J7 381 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 HCN3Q9P1Z3 774 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 PHF11Q9UIL8 331 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 ZNF229Q9UJW7 825 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SPACA6W5XKT8 324 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 HYAL3O43820 417 aaPredicted RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 ST6GAL1P15907 406 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 HOXD11P31277 338 aaPredicted RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 S100A5P33763 92 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 GABRA3P34903 492 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 TGM4P49221 684 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 BCAP31P51572 246 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SLC16A1P53985 500 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 IFITM3Q01628 133 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 RELAQ04206 551 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SPHARQ15513 63 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 OR2G6Q5TZ20 316 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 NIPAL1Q6NVV3 410 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 LINC00299Q6ZSB3 139 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 LHFPL3Q86UP9 236 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 ABCA7Q8IZY2 2146 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 CYP4Z2PQ8N1L4 340 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 AVL9Q8NBF6 648 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SFXN5Q8TD22 340 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 TMEM80Q96HE8 168 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 C10orf90Q96M02 699 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 NUAK2Q9H093 628 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 FBRSQ9HAH7 460 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 BCL2L10Q9HD36 194 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 CA14Q9ULX7 337 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SLC7A7Q9UM01 511 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 CAB39Q9Y376 341 aaPredicted RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 RPL36Q9Y3U8 105 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 ATG2AQ2TAZ0 1938 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 A0A0A6YYC8 382 aaPredicted RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 FAM183AA6NL82 134 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 DUXAA6NLW8 204 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 I3L1I5 382 aaPredicted RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 STK25O00506 426 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 ZNF10P21506 573 aaPredicted RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 MAN2A2P49641 1150 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 MAT1AQ00266 395 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 ST3GAL3Q11203 375 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SLC13A2Q13183 592 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 LARS2Q15031 903 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 TRAM2Q15035 370 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 MAPK14Q16539 360 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 KIF18BQ86Y91 864 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SMRP1Q8NCR6 262 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 GRHL3Q8TE85 626 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 HTRA1Q92743 480 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 ART5Q96L15 291 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SLC6A18Q96N87 628 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 MS4A4EQ96PG1 132 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 GSDMCQ9BYG8 508 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 WDR12Q9GZL7 423 aaKnown RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 TRIM45Q9H8W5 580 aaPredicted RBP10.23□□□□□ -0.77
DDX56-203ENST00000421223 MARCH7Q9H992 704 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 SNTG1Q9NSN8 517 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 MAT2BQ9NZL9 334 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 MMP17Q9ULZ9 603 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 SH3D21A4FU49 640 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 CCRL2O00421 344 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 SDC3O75056 442 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 IGHV4-34P06331 123 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 USP43Q70EL4 1123 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 TRIM69Q86WT6 500 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 MORN4Q8NDC4 146 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 FLVCR1-AS1Q8TAF5 88 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 PIGXQ8TBF5 258 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 GATAD2BQ8WXI9 593 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 MOAP1Q96BY2 351 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 GIMAP5Q96F15 307 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 CRELD1Q96HD1 420 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 CEP19Q96LK0 163 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 TRNT1Q96Q11 434 aaKnown RBP10.22□□□□□ -0.77
DDX56-203ENST00000421223 SMAD5Q99717 465 aaKnown RBP10.22□□□□□ -0.77
DDX56-203ENST00000421223 BTBD2Q9BX70 525 aa10.22□□□□□ -0.77
DDX56-203ENST00000421223 LIPT1Q9Y234 373 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms