RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 SLC5A8Q8N695 610 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 OR5M3Q8NGP4 307 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 TSLPQ969D9 159 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 TRIM2Q9C040 744 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 FBXO8Q9NRD0 319 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 SLC6A13Q9NSD5 602 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 RAB26Q9ULW5 256 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 TRBV11-1A0A0K0K1C0 115 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 FITM1A5D6W6 292 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 MAGEA13PA6NCF6 341 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 HMGN4O00479 90 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 IMPDH2P12268 514 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 SDHBP21912 280 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 IDH2P48735 452 aaKnown RBP6.9□□□□□ -1.3
BDNF-209ENST00000420794 MC2RQ01718 297 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 CHRNEQ04844 493 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 EXT1Q16394 746 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 CRB2Q5IJ48 1285 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 CCNJQ5T5M9 372 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 FAM69BQ5VUD6 431 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 SLITRK4Q8IW52 837 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 TEX47Q8TBZ9 253 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 SLC2A12Q8TD20 617 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 ALPK1Q96QP1 1244 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 GPN2Q9H9Y4 310 aaPredicted RBP6.9□□□□□ -1.3
BDNF-209ENST00000420794 SLAMF7Q9NQ25 335 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 UBQLN4Q9NRR5 601 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 OLAHQ9NV23 265 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 CTSFQ9UBX1 484 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 CROCCQ5TZA2 2017 aa6.9□□□□□ -1.3
BDNF-209ENST00000420794 CHD9Q3L8U1 2897 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 ABCB7O75027 752 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 TNFRSF21O75509 655 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 SAGP10523 405 aaPredicted RBP6.9□□□□□ -1.31
BDNF-209ENST00000420794 BMP2P12643 396 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 CCL4P13236 92 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 ISXQ2M1V0 245 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 SWT1Q5T5J6 900 aaKnown RBP6.9□□□□□ -1.31
BDNF-209ENST00000420794 CPEB2Q7Z5Q1 589 aaKnown RBP6.9□□□□□ -1.31
BDNF-209ENST00000420794 OR2L13Q8N349 312 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 LRFN3Q9BTN0 628 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 PTGES2Q9H7Z7 377 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 ANKRA2Q9H9E1 313 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 EMC3Q9P0I2 261 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 ELOA3DA6NLF2 546 aaPredicted RBP6.9□□□□□ -1.31
BDNF-209ENST00000420794 OR6C76A6NM76 312 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 CPSF4LA6NMK7 179 aaKnown RBP6.9□□□□□ -1.31
BDNF-209ENST00000420794 PDLIM1O00151 329 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 HCRTR2O43614 444 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 PPP1R8Q12972 351 aaKnown RBP6.9□□□□□ -1.31
BDNF-209ENST00000420794 TARDBPQ13148 414 aaKnown RBP eCLIP6.9□□□□□ -1.31
BDNF-209ENST00000420794 GK3PQ14409 553 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 DUSP5Q16690 384 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 ELOA3BQ3SY89 546 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 HMGN2P46Q86SG4 172 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 CALHM3Q86XJ0 350 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 KBTBD2Q8IY47 623 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 ELOA3Q8NG57 546 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 SUN5Q8TC36 379 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 SLC38A2Q96QD8 506 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 ZNF300Q96RE9 604 aaPredicted RBP6.9□□□□□ -1.31
BDNF-209ENST00000420794 ADOQ96SZ5 270 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 VN1R1Q9GZP7 353 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 THSD1Q9NS62 852 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 CES1P1Q9UKY3 287 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 FARSAQ9Y285 508 aaKnown RBP6.9□□□□□ -1.31
BDNF-209ENST00000420794 SLC35A3Q9Y2D2 325 aa6.9□□□□□ -1.31
BDNF-209ENST00000420794 FGF5P12034 268 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ITIH1P19827 911 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GSTM3P21266 225 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PPICP45877 212 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GSSP48637 474 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ALDH3A2P51648 485 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GALNT5Q7Z7M9 940 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 OR4K17Q8NGC6 315 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 FAM81AQ8TBF8 368 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ASB15Q8WXK1 588 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 TMEM234Q8WY98 164 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 UCN3Q969E3 161 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 DACT3Q96B18 629 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 HSPBAP1Q96EW2 488 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 SLC35A4Q96G79 324 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 IP6K3Q96PC2 410 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 BCL2L10Q9HD36 194 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 RHBDL2Q9NX52 303 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 N6AMT1Q9Y5N5 214 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 SCN8AQ9UQD0 1980 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 NUP214P35658 2090 aaPredicted RBP6.89□□□□□ -1.31
BDNF-209ENST00000420794 COL4A3Q01955 1670 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 TRBV5-3A0A0A0MS03 114 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 PCP4L1A6NKN8 68 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 SYT5O00445 386 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GMFGO60234 142 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 TFPIP10646 304 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 GP1BBP13224 206 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 CXCR1P25024 350 aa6.89□□□□□ -1.31
BDNF-209ENST00000420794 ITGA3P26006 1051 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms