RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 TRIM49CP0CI26 452 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 NCF2P19878 526 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 ZNF10P21506 573 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 CCR1P32246 355 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 NDUFV3P56181 108 aaKnown RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 ENPP2Q13822 863 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 EMC2Q15006 297 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 LPAL2Q16609 132 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 TATDN3Q17R31 274 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 UNC50Q53HI1 259 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 C2CD6Q53TS8 623 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 ZNF311Q5JNZ3 666 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 TCHHL1Q5QJ38 904 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 MUC21Q5SSG8 566 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 LCE3CQ5T5A8 94 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 ATF7IP2Q5U623 682 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 NUFIP2Q7Z417 695 aaKnown RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 GOLGA7Q7Z5G4 137 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 LHFPL4Q7Z7J7 247 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 RANBP3LQ86VV4 465 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 NBPF5PQ86XG9 351 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 UBQLNLQ8IYU4 475 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 ARFGAP2Q8N6H7 521 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 BBOF1Q8ND07 529 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 WDR36Q8NI36 951 aaKnown RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 LRRC15Q8TF66 581 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 GIMAP1Q8WWP7 306 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 OSTF1Q92882 214 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 NT5C3BQ969T7 300 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 MOCOSQ96EN8 888 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 SLC41A3Q96GZ6 507 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 PIWIL1Q96J94 861 aaKnown RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 ANKRD27Q96NW4 1050 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 VPS35Q96QK1 796 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 CPXM1Q96SM3 734 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 ATOH8Q96SQ7 321 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 PYGO2Q9BRQ0 406 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 TRIM51Q9BSJ1 452 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 MCRIP2Q9BUT9 160 aaKnown RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 PKIBQ9C010 78 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 STRADBQ9C0K7 418 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 LIME1Q9H400 295 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 METTL7AQ9H8H3 244 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 FN3KRPQ9HA64 309 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 CALHM2Q9HA72 323 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 NRN1Q9NPD7 142 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 FAM114A2Q9NRY5 505 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 EIF3KQ9UBQ5 218 aaKnown RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 RNF14Q9UBS8 474 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 PCSK1NQ9UHG2 260 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 PURGQ9UJV8 347 aaKnown RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 IKZF3Q9UKT9 509 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 OR10H1Q9Y4A9 318 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 KLF2Q9Y5W3 355 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 AP4B1Q9Y6B7 739 aa2.36□□□□□ -2.03
PTPRC-207ENST00000418674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.36□□□□□ -2.03
PTPRC-207ENST00000418674 RALGAPA1Q6GYQ0 2036 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 RNF222A6NCQ9 220 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 NCF1BA6NI72 391 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 ASB14A6NK59 587 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 RNF212BA8MTL3 300 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 NCF1CA8MVU1 366 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PPIAL4DF5H284 164 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 L7N2F9 121 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CYB561D2O14569 222 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CTAGE5O15320 804 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 ECI2O75521 394 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 TM7SF2O76062 418 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 UFL1O94874 794 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SORBS2O94875 1100 aaKnown RBP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 TOXO94900 526 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 OR9G9P0C7N8 305 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 UQCRFS1P1P0C7P4 283 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 DPEP1P16444 411 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 HNF1AP20823 631 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CEBPDP49716 269 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 ACADVLP49748 655 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PGFP49763 221 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PRELPP51888 382 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 KRTAP10-3P60369 221 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SELPLGQ14242 412 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SIX1Q15475 284 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CCL14Q16627 93 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 EXOC3L2Q2M3D2 409 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PARP6Q2NL67 630 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PHYHD1Q5SRE7 291 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 C1orf185Q5T7R7 199 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PRAMEF20Q5VT98 475 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 AGAP7PQ5VUJ5 663 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 TAF3Q5VWG9 929 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 TTC23Q5W5X9 447 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SEL1L3Q68CR1 1132 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SLC39A4Q6P5W5 647 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 C16orf87Q6PH81 154 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 ATRAIDQ6UW56 229 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SYT10Q6XYQ8 523 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 MOB2Q70IA6 237 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CENPUQ71F23 418 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 VPS36Q86VN1 386 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 GPBP1Q86WP2 473 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms