RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SCN2BO60939 215 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 CLDN14O95500 239 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 GLI4P10075 376 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 HTR1EP28566 365 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 MASP1P48740 699 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 SMSP52788 366 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 OCRLQ01968 901 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 WIPI1Q5MNZ9 446 aaPredicted RBP18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 APOOLQ6UXV4 268 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 LRRC34Q8IZ02 419 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 FADS6Q8N9I5 356 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 SLC16A11Q8NCK7 471 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 ZFP28Q8NHY6 868 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 C16orf58Q96GQ5 468 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 NUF2Q9BZD4 464 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 NOP53Q9NZM5 478 aaKnown RBP18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 SLC6A5Q9Y345 797 aa18.77■□□□□ 0.6
PKNOX1-202ENST00000418336 NUP214P35658 2090 aaPredicted RBP18.77■□□□□ 0.59
PKNOX1-202ENST00000418336 PCNX3Q9H6A9 2034 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 ARHGAP21Q5T5U3 1957 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 A0A1W2PRB8 838 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 TTC36A6NLP5 189 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 SDHDO14521 159 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 EMC8O43402 210 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 WDR1O75083 606 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 PRF1P14222 555 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 BMP7P18075 431 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 PRPS1L1P21108 318 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 GABRA3P34903 492 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 EVI2BP34910 448 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 RPL3P39023 403 aaKnown RBP18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 ADH7P40394 386 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 KIR3DL1P43629 444 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 GFRA1P56159 465 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 PHC1P78364 1004 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 TFF3Q07654 80 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 DUSP5Q16690 384 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 TTMPQ5BVD1 217 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 HHATQ5VTY9 493 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 ZNF585AQ6P3V2 769 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 MAVSQ7Z434 540 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 ZAR1Q86SH2 424 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 PLCZ1Q86YW0 608 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 ULK2Q8IYT8 1036 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 MGARPQ8TDB4 240 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 OR5P2Q8WZ92 322 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 MS4A4EQ96PG1 132 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 UGT2B28Q9BY64 529 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 Q9N2J8 555 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 EQTNQ9NQ60 294 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 FBXO34Q9NWN3 711 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 OR10H1Q9Y4A9 318 aa18.76■□□□□ 0.59
PKNOX1-202ENST00000418336 ZIC3O60481 467 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 CBR3O75828 277 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 TOXO94900 526 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 ALDOCP09972 364 aaKnown RBP18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 IL12BP29460 328 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 GPC1P35052 558 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 MRPS22P82650 360 aaKnown RBP18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 PMPCAQ10713 525 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 MAD2L1Q13257 205 aaPredicted RBP18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 C1orf185Q5T7R7 199 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 CPTPQ5TA50 214 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 AGBL2Q5U5Z8 902 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 TMEM211Q6ICI0 200 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 OGFOD2Q6N063 350 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 YRDCQ86U90 279 aaKnown RBP18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 EID3Q8N140 333 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 CDRT4Q8N9R6 151 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 RAB3IL1Q8TBN0 382 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 WDYHV1Q96HA8 205 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 PAIP2Q9BPZ3 127 aaKnown RBP18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 TREX2Q9BQ50 279 aaPredicted RBP18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 BHLHE41Q9C0J9 482 aaPredicted RBP18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 GPATCH2Q9NW75 528 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 ACAD8Q9UKU7 415 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 ABCG2Q9UNQ0 655 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 EIF3LQ9Y262 564 aaKnown RBP18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 NOTCH2Q04721 2471 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 CSMD2Q7Z408 3487 aa18.75■□□□□ 0.59
PKNOX1-202ENST00000418336 A0A0G2JNJ9 132 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 FIGNL2A6NMB9 653 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 ZNF195O14628 629 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 TRAPPC6AO75865 159 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 C6orf47O95873 294 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 H2AFXP16104 143 aaPredicted RBP18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 PRKAG1P54619 331 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 B3GALT5-AS1P59052 145 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 WLSQ5T9L3 541 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 OR5M10Q6IEU7 315 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 B3GNT6Q6ZMB0 384 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 CCDC71Q8IV32 467 aaPredicted RBP18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 CEP70Q8NHQ1 597 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 FBXO30Q8TB52 745 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 SDCCAG3Q96C92 435 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 MAELQ96JY0 434 aaKnown RBP18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 TEX37Q96LM6 180 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 SH3GL2Q99962 352 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 THAP1Q9NVV9 213 aa18.74■□□□□ 0.59
PKNOX1-202ENST00000418336 Q9UFV3 132 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms