RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CLCA3PQ9Y6N3 262 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 CENPVL1A0A0U1RR11 272 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 STK25O00506 426 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 CDC42EP2O14613 210 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 RGS13O14921 159 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 ALPPP05187 535 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 HNRNPA1P09651 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC9-208ENST00000417496 GABRA5P31644 462 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 ATP6V1E1P36543 226 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 DDOSTP39656 456 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 ZIC1Q15915 447 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 Q5BKY6 102 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 GNPDA2Q8TDQ7 276 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 DEPDC7Q96QD5 511 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 CRISPLD2Q9H0B8 497 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 ISG20L2Q9H9L3 353 aaKnown RBP13.56□□□□□ -0.24
HDAC9-208ENST00000417496 GPSM3Q9Y4H4 160 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 HMX3A6NHT5 357 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 TTC36A6NLP5 189 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SOCS6O14544 535 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 HRO43593 1189 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 DNAJB6O75190 326 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 NFATC1O95644 943 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 CSNK2A2P19784 350 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 PEBP1P30086 187 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 MAT2AP31153 395 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 AHRP35869 848 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 TRA2BP62995 288 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 BTN3A2P78410 334 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 ZNF155Q12901 538 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 TRAM2Q15035 370 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 KIAA1211LQ6NV74 962 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SLC48A1Q6P1K1 146 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 FAM111BQ6SJ93 734 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 HSDL2Q6YN16 418 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 C16orf62Q7Z3J2 963 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 Q8N402 240 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 GDPD1Q8N9F7 314 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 OR2L3Q8NG85 312 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SPRYD4Q8WW59 207 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SLC7A6Q92536 515 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SLC35A4Q96G79 324 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 ZNF764Q96H86 408 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SECISBP2Q96T21 854 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 TBX5Q99593 518 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 TEX101Q9BY14 249 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 MED20Q9H944 212 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 GIMAP4Q9NUV9 329 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 MRPS18AQ9NVS2 196 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 ACSL5Q9ULC5 683 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 GSTK1Q9Y2Q3 226 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 CASC3O15234 703 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SURF4O15260 269 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 ASGR2P07307 311 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SLC2A2P11168 524 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 PSKH1P11801 424 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 F3P13726 295 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 MPIP34949 423 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 RGS8P57771 180 aaPredicted RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 ST3GAL3Q11203 375 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 LRRC32Q14392 662 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 CCNJQ5T5M9 372 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 MRM1Q6IN84 353 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 BHLHB9Q6PI77 547 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 SMARCD3Q6STE5 483 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 MARCH9Q86YJ5 346 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 KLBQ86Z14 1044 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 VWA5B2Q8N398 1253 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 HDDC3Q8N4P3 179 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 OR2L5Q8NG80 312 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 CHFRQ96EP1 664 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 FRMD6Q96NE9 622 aa13.55□□□□□ -0.24
HDAC9-208ENST00000417496 ZFR2Q9UPR6 939 aaKnown RBP13.55□□□□□ -0.24
HDAC9-208ENST00000417496 TRBV23OR9-2A0A075B6M9 112 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.54□□□□□ -0.24
HDAC9-208ENST00000417496 A0A1B0GVC2 190 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 A6NIN4 97 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 KDM4EB2RXH2 506 aaPredicted RBP13.54□□□□□ -0.24
HDAC9-208ENST00000417496 PROM1O43490 865 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 CTBP2P56545 445 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 PRR5P85299 388 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 IL18Q14116 193 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 TMEM35AQ53FP2 167 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 AADACL4Q5VUY2 407 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 TMEM64Q6YI46 380 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 RASSF6Q6ZTQ3 369 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 PLEKHM3Q6ZWE6 761 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 CPOQ8IVL8 374 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 RDH10Q8IZV5 341 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 RAB42Q8N4Z0 105 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 LINC00471Q8N535 108 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 ASCC1Q8N9N2 400 aaKnown RBP13.54□□□□□ -0.24
HDAC9-208ENST00000417496 OR51G2Q8NGK0 314 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 NEIL3Q8TAT5 605 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 ENKURQ8TC29 256 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 FGF13Q92913 245 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 ASB16Q96NS5 453 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
HDAC9-208ENST00000417496 MCHR1Q99705 422 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms