RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ACVR1BP36896 505 aa13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 HCCSP53701 268 aa13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 E2F1Q01094 437 aa13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 C1orf94Q6P1W5 598 aa13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 OR4D9Q8NGE8 314 aa13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 METTL2AQ96IZ6 378 aaKnown RBP13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 MED28Q9H204 178 aa13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 WSB2Q9NYS7 404 aaPredicted RBP13.68□□□□□ -0.22
SEMA3F-202ENST00000413852 NARSO43776 548 aaKnown RBP13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 CFDP00746 253 aaPredicted RBP13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 THY1P04216 161 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 CLUP10909 449 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 BTCP35070 178 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 NTHL1P78549 312 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 RAB40BQ12829 278 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 SF3A2Q15428 464 aaKnown RBP13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 KLHL12Q53G59 568 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 TPGS2Q68CL5 300 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 PLBD1Q6P4A8 553 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 ZNF793Q6ZN11 406 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 FAM129CQ86XR2 697 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 NRMQ8IXM6 262 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 MSANTD3Q96H12 275 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 SAMD8Q96LT4 415 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 KCNJ15Q99712 375 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 ZNF649Q9BS31 505 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 ZFP64Q9NPA5 681 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 HINT3Q9NQE9 182 aaKnown RBP13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 P2RX2Q9UBL9 471 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 IRAK3Q9Y616 596 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 AP1M2Q9Y6Q5 423 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 CENPVL1A0A0U1RR11 272 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 TMEM129A0AVI4 362 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 GPR1P46091 355 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 VSX2P58304 361 aaPredicted RBP13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 RPA4Q13156 261 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 LTB4RQ15722 352 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 NDUFAF5Q5TEU4 345 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 C18orf63Q68DL7 685 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 CEP76Q8TAP6 659 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 ZNF689Q96CS4 500 aaPredicted RBP13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 C11orf49Q9H6J7 331 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 NIPAL2Q9H841 368 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 LIPT1Q9Y234 373 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 PCDHGB7Q9Y5F8 929 aa13.67□□□□□ -0.22
SEMA3F-202ENST00000413852 TRDV1A0A1B0GX56 115 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 LATS1O95835 1130 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 GIFP27352 417 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 ESCO2Q56NI9 601 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 OR8K5Q8NH50 307 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 WDR89Q96FK6 387 aaPredicted RBP13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 MED18Q9BUE0 208 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 FGF20Q9NP95 211 aaPredicted RBP13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 NLGN3Q9NZ94 848 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 IL36AQ9UHA7 158 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 FBXL4Q9UKA2 621 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 ICKQ9UPZ9 632 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 SPINT1O43278 529 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 SLC43A1O75387 559 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 MT-ND4P03905 459 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 GYPBP06028 91 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 CRYZQ08257 329 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 CAMK1Q14012 370 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 RAB33AQ14088 237 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 MINDY4Q4G0A6 757 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 ZNF658BQ4V348 819 aaPredicted RBP13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 ZDHHC20Q5W0Z9 365 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 LYPD4Q6UWN0 246 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 RRM2BQ7LG56 351 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 ZNF680Q8NEM1 530 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 MRGPRX3Q96LB0 322 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 AMDHD1Q96NU7 426 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 GTPBP2Q9BX10 602 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 MS4A8Q9BY19 250 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 SYNPO2LQ9H987 977 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 FLVCR2Q9UPI3 526 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 HLA-DQB1P01920 261 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 KELP23276 732 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 MMP12P39900 470 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 PER3P56645 1201 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 DCDC1P59894 354 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 ADAM15Q13444 863 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 AGERQ15109 404 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 NTRK2Q16620 822 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 ZSWIM7Q19AV6 140 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 TCEAL5Q5H9L2 206 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 CREB3L2Q70SY1 520 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 CPXM2Q8N436 756 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 C12orf66Q96MD2 445 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 GLTPQ9NZD2 209 aa13.66□□□□□ -0.22
SEMA3F-202ENST00000413852 PROM1O43490 865 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 ZIC2O95409 532 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 ANKRD34CP0C6C1 535 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 RPL3P39023 403 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 RPL6Q02878 288 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 TEAD2Q15562 447 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 ZNF311Q5JNZ3 666 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 ZBTB37Q5TC79 503 aa13.65□□□□□ -0.22
SEMA3F-202ENST00000413852 LHX8Q68G74 356 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms