RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ARHGDIAP52565 204 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 CBX1P83916 185 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 FCHO2Q0JRZ9 810 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 GPM6BQ13491 265 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 CCL14Q16627 93 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 TATDN3Q17R31 274 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 C14orf28Q4W4Y0 310 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 OTUD3Q5T2D3 398 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZC2HC1BQ5TFG8 222 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 ATF7IP2Q5U623 682 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 PMF1Q6P1K2 205 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 DOK6Q6PKX4 331 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 TMEM184AQ6ZMB5 413 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 KIAA1328Q86T90 577 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 PRSS33Q8NF86 280 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 RFESDQ8TAC1 157 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 CNIH3Q8TBE1 160 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 RAET1EQ8TD07 263 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 TBCKQ8TEA7 893 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 SLC5A11Q8WWX8 675 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 SENP8Q96LD8 212 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 TTYH2Q9BSA4 534 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 PUS3Q9BZE2 481 aaKnown RBP3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 COMMD4Q9H0A8 199 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 SLC25A51Q9H1U9 297 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 MEAF6Q9HAF1 191 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 ELOVL3Q9HB03 270 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 EXTL2Q9UBQ6 330 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 CTSZQ9UBR2 303 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 EIF3LQ9Y262 564 aaKnown RBP3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 MRPS33Q9Y291 106 aaKnown RBP3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 GRIN2DO15399 1336 aa3.88□□□□□ -1.79
HMGB3P31-201ENST00000413333 C15orf38-AP3S2A0A0A6YYH1 394 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 TRIM64CA6NLI5 447 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 PRR23D1E9PI22 279 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 H7C423 109 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 CTAGE5O15320 804 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 STX7O15400 261 aaKnown RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 LRRTM2O43300 516 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 DCXO43602 365 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 SPAG6O75602 509 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 IGHG3P01860 377 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 WNT2P09544 360 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 PRR23D2P0DMB1 279 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 UQCRC2P22695 453 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 HMGCLP35914 325 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 ETV5P41161 510 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 NOVA1P51513 510 aaKnown RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 RPS6P62753 249 aaKnown RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 NTHL1P78549 312 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 PLOD1Q02809 727 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 ELAVL2Q12926 359 aaKnown RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 IL24Q13007 206 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 CRMP1Q14194 572 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 ABRAXAS2Q15018 415 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZIC1Q15915 447 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 PCK2Q16822 640 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 CEP55Q53EZ4 464 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 CYBRD1Q53TN4 286 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 MS4A13Q5J8X5 152 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 CELF3Q5SZQ8 465 aaKnown RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 C9orf66Q5T8R8 295 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 CENPPQ6IPU0 288 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 RFWD3Q6PCD5 774 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZNF613Q6PF04 617 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 CYS1Q717R9 158 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 LRRC70Q7Z2Q7 622 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 SPEM1Q8N4L4 309 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 C4orf32Q8N8J7 132 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 WDSUB1Q8N9V3 476 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 BEST4Q8NFU0 473 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 OR4Q3Q8NH05 313 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZNF671Q8TAW3 534 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 SPRYD4Q8WW59 207 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 CRYGNQ8WXF5 182 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 RPL3LQ92901 407 aaKnown RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 NTNG2Q96CW9 530 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 C11orf24Q96F05 449 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 TRIM51Q9BSJ1 452 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 TRIM9Q9C026 710 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 POLR3FQ9H1D9 316 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 HEXA-AS1Q9H8Q6 139 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 RNF14Q9UBS8 474 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 MLXQ9UH92 298 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 IKBKGQ9Y6K9 419 aa3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 DDX49Q9Y6V7 483 aaKnown RBP3.87□□□□□ -1.79
HMGB3P31-201ENST00000413333 TDRD15B5MCY1 1934 aaKnown RBP3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 TRBV7-9A0A0J9YWB2 115 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 FOXI3A8MTJ6 420 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 ZSCAN12O43309 604 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 ADCY5O95622 1261 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 JCHAINP01591 159 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 H2AFXP16104 143 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 XRCC1P18887 633 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 EMDP50402 254 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 UBE2HP62256 183 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 RIPK1Q13546 671 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 LINC00242Q5T6M2 205 aa3.86□□□□□ -1.79
HMGB3P31-201ENST00000413333 LEMD1Q68G75 181 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms