RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 TIPARPQ7Z3E1 657 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 CPEB2Q7Z5Q1 589 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 TSEN54Q7Z6J9 526 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 HMGN2P46Q86SG4 172 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 ZAR1Q86SH2 424 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 COMTD1Q86VU5 262 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 TMPRSS12Q86WS5 348 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 ZNF619Q8N2I2 560 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 ZNF441Q8N8Z8 693 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 ICA1LQ8NDH6 482 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CATSPER1Q8NEC5 780 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 NFAM1Q8NET5 270 aaPredicted RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 B3GNT7Q8NFL0 401 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 OR4N2Q8NGD1 307 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 OR2Y1Q8NGV0 311 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CT55Q8WUE5 264 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PROX1Q92786 737 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 EME1Q96AY2 570 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 C8orf44Q96CB5 159 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 VPS50Q96JG6 964 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 ZNF354BQ96LW1 612 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 GAL3ST4Q96RP7 486 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CIB1Q99828 191 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 TACO1Q9BSH4 297 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 BDH2Q9BUT1 245 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 NUDT9Q9BW91 350 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PINK1Q9BXM7 581 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 SEMA4CQ9C0C4 833 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 KLHL4Q9C0H6 718 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 B3GNT4Q9C0J1 378 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 WWTR1Q9GZV5 400 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 SAP130Q9H0E3 1048 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 NXF5Q9H1B4 397 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 TRIM45Q9H8W5 580 aaPredicted RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 NTN4Q9HB63 628 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 FBXO34Q9NWN3 711 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 NDUFAF4Q9P032 175 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 DNAJB9Q9UBS3 223 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 ZNF223Q9UK11 482 aaPredicted RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 MKLN1Q9UL63 735 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CBLCQ9ULV8 474 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 OAZ3Q9UMX2 235 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PPIEQ9UNP9 301 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 CFL2Q9Y281 166 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 ZNF443Q9Y2A4 671 aaPredicted RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 GPR55Q9Y2T6 319 aaPredicted RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 SH3GLB1Q9Y371 365 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PTRH2Q9Y3E5 179 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 DTNAQ9Y4J8 743 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 GVINP1Q7Z2Y8 2422 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 NPIPA5A0A0B4J1W7 369 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 C2orf92A0A1B0GVN3 265 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 A0A1W2PQ72 361 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 NPIPA7E9PJI5 369 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 M0R3H8 397 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 SYT5O00445 386 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 PEX12O00623 359 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 SLC30A4O14863 429 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 PCDH17O14917 1159 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 DPM1O60762 260 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 UGT2B17O75795 530 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 DNAJB5O75953 348 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 SEC24DO94855 1032 aaPredicted RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 DIRAS1O95057 198 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 TNFSF15O95150 251 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 IGKV1D-16P01601 117 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 IFNW1P05000 195 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 DBIP07108 87 aaKnown RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 THBS1P07996 1170 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 CD63P08962 238 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 RAB40ALP0C0E4 278 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 CCNYL3P0C7X3 344 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 NPIPA8P0DM63 369 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ZNF23P17027 643 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ITGA2P17301 1181 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ATP6V1C1P21283 382 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 DRD5P21918 477 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 STAT5AP42229 794 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 PPICP45877 212 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 RFX3P48380 749 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 IST1P53990 364 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 AQP4P55087 323 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 SLC26A5P58743 744 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 DCAF7P61962 342 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 EEF1A1P68104 462 aaKnown RBP6.15□□□□□ -1.42
VPS41-204ENST00000413141 GABREP78334 506 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 PUM1Q14671 1186 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS41-204ENST00000413141 PCOLCEQ15113 449 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 GPR68Q15743 365 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 MAPK14Q16539 360 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 NRF1Q16656 503 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.15□□□□□ -1.42
VPS41-204ENST00000413141 FLYWCH1Q4VC44 716 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 LIN52Q52LA3 116 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ZNF311Q5JNZ3 666 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 RNF220Q5VTB9 566 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 AP1ARQ63HQ0 302 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 OR2T5Q6IEZ7 315 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 ZNF836Q6ZNA1 936 aa6.15□□□□□ -1.42
VPS41-204ENST00000413141 SLC29A4Q7RTT9 530 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms