RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 PSMA3P25788 255 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 SKP1P63208 163 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 TUBA4AP68366 448 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 TAP2Q03519 686 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 FOXF2Q12947 444 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 LCP2Q13094 533 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 SEMA3AQ14563 771 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 OR4D1Q15615 310 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 KCTD21Q4G0X4 260 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 AARS2Q5JTZ9 985 aaKnown RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 INTS11Q5TA45 600 aaKnown RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 CAPN13Q6MZZ7 669 aaPredicted RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 OGFOD2Q6N063 350 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 ZNF549Q6P9A3 640 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 BTLAQ7Z6A9 289 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 AMIGO2Q86SJ2 522 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 RETREG3Q86VR2 466 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 DDIASQ8IXT1 998 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 PM20D2Q8IYS1 436 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 SNX31Q8N9S9 440 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 OR4L1Q8NH43 312 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 TSPEARQ8WU66 669 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 ZNF480Q8WV37 535 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 LRTOMTQ8WZ04 291 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 SLCO4A1Q96BD0 722 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 DGCR14Q96DF8 476 aaKnown RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 TM4SF19Q96DZ7 209 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 MPP4Q96JB8 637 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 JSRP1Q96MG2 331 aaPredicted RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 WFIKKN1Q96NZ8 548 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 HS3ST6Q96QI5 342 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 PRPF18Q99633 342 aaKnown RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 SLC30A3Q99726 388 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 TIMP4Q99727 224 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 HOPXQ9BPY8 73 aaPredicted RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 MED18Q9BUE0 208 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 C1QTNF3Q9BXJ4 246 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 TRIM54Q9BYV2 358 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 ANKRD60Q9BZ19 345 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 PCDHAC1Q9H158 963 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 CCDC68Q9H2F9 335 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 ZNF703Q9H7S9 590 aaPredicted RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 COQ10BQ9H8M1 238 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 AKTIPQ9H8T0 292 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 ZFP64Q9NPA5 681 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 ACKR4Q9NPB9 350 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 AIG1Q9NVV5 245 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 BOKQ9UMX3 212 aaPredicted RBP6.33□□□□□ -1.4
LSM8-202ENST00000411938 CAMK2AQ9UQM7 478 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 ATG4BQ9Y4P1 393 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 DNAJC15Q9Y5T4 150 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 SNX13Q9Y5W8 968 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 NINQ8N4C6 2090 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 CR1P17927 2039 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 CUBNO60494 3623 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 MED12Q93074 2177 aa6.33□□□□□ -1.4
LSM8-202ENST00000411938 TENM1Q9UKZ4 2725 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 MYOCOSA0A1B0GUC4 107 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 DHRS12A0PJE2 317 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 C7orf72A4D263 438 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 MBD3L3A6NE82 208 aaPredicted RBP6.32□□□□□ -1.4
LSM8-202ENST00000411938 NPEPPSL1A6NEC2 478 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 CCDC160A6NGH7 325 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 SYCE1LA8MT33 242 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 H3BMM5 538 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 H3BNH8 94 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 ARPC2O15144 300 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 AKAP10O43572 662 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 LCMT2O60294 686 aaKnown RBP6.32□□□□□ -1.4
LSM8-202ENST00000411938 CRCPO75575 148 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 TIPRLO75663 272 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 CHEK2O96017 543 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 SERPIND1P05546 499 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 GPIP06744 558 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 BMP2P12643 396 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 RNH1P13489 461 aaKnown RBP6.32□□□□□ -1.4
LSM8-202ENST00000411938 MTHFD2P13995 350 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 ATP6V1B1P15313 513 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 ALOX12P18054 663 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 TSPAN8P19075 237 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 HRH2P25021 359 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 PSMA4P25789 261 aaKnown RBP6.32□□□□□ -1.4
LSM8-202ENST00000411938 PPP2R1BP30154 601 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 GRK3P35626 688 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 SOX18P35713 384 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 MC3RP41968 323 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 ALDH3B2P48448 385 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 GPR143P51810 404 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 TIAL1Q01085 375 aaKnown RBP eCLIP6.32□□□□□ -1.4
LSM8-202ENST00000411938 CLCQ05315 142 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 CRYZQ08257 329 aaKnown RBP6.32□□□□□ -1.4
LSM8-202ENST00000411938 DUSP8Q13202 625 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 GK3PQ14409 553 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 ATP6AP1Q15904 470 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 NRF1Q16656 503 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 PHKG1Q16816 387 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 UGT3A2Q3SY77 523 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 PDCD4Q53EL6 469 aaKnown RBP6.32□□□□□ -1.4
LSM8-202ENST00000411938 XKR7Q5GH72 579 aa6.32□□□□□ -1.4
LSM8-202ENST00000411938 TBCELQ5QJ74 424 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms