RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 NUP50Q9UKX7 468 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 PSME2Q9UL46 239 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 SLC7A7Q9UM01 511 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 PRPF19Q9UMS4 504 aaKnown RBP2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 CSNK1G3Q9Y6M4 447 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 NRXN3Q9Y4C0 1643 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 RTL9Q8NET4 1388 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 ROBO3Q96MS0 1386 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 KIF13AQ9H1H9 1805 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 MYH6P13533 1939 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 CHD4Q14839 1912 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 DIP2CQ9Y2E4 1556 aa2.19□□□□□ -2.06
HMGB3P2-201ENST00000411913 ADAMTSL3P82987 1691 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 KIF1AQ12756 1690 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CLUHO75153 1309 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 FAM205AQ6ZU69 1335 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 SIPA1L3O60292 1781 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 ANKRD36CQ5JPF3 1778 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 BCORQ6W2J9 1755 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 MARF1Q9Y4F3 1742 aaKnown RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 A0A0B4J203 849 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 A0A0X1KG70 313 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 EXOC1LA0A1B0GW35 172 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 A0A1W2PN81 502 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 A4D1N5 150 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CASTOR2A6NHX0 329 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 DUXAA6NLW8 204 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 A8MU76 341 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 ZNF487B1APH4 448 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 TCP10L2B9ZVM9 353 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 H7C0C1 242 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 PDHXO00330 501 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 TXNDC9O14530 226 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 DNALI1O14645 258 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 SLC22A2O15244 555 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 PRKNO60260 465 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 FMO6PO60774 539 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 PRKRAO75569 313 aaKnown RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 PRDM1O75626 825 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 B3GALNT1O75752 331 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 ATP6AP2O75787 350 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 KCNK2O95069 426 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 PGLSO95336 258 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 PIGNO95427 931 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 IGLV1-44P01699 117 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 PGK2P07205 417 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 TRAPPC2P0DI81 140 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 TRAPPC2BP0DI82 140 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CALM1P0DP23 149 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CALM2P0DP24 149 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CALM3P0DP25 149 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 SPP1P10451 314 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 GZMAP12544 262 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 EEF2P13639 858 aaKnown RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 KRT13P13646 458 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 PAX1P15863 534 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 ITIH1P19827 911 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CCNA2P20248 432 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 MSH3P20585 1137 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CALML3P27482 149 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CD40LGP29965 261 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CHRNA7P36544 502 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 POLR2IP36954 125 aaKnown RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 TALDO1P37837 337 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 DDOSTP39656 456 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 OPRL1P41146 370 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 MNDAP41218 407 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CASP3P42574 277 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 NAMPTP43490 491 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 CDX1P47902 265 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 KCNJ1P48048 391 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 HLCSP50747 726 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 MTCP1P56278 107 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 POLR2GP62487 172 aaKnown RBP eCLIP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 ESRRGP62508 458 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 ASIC1P78348 528 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 S100A12P80511 92 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 MS4A2Q01362 244 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 GNA12Q03113 381 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 KDSRQ06136 332 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 LGALS3BPQ08380 585 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 FCHO2Q0JRZ9 810 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 BST1Q10588 318 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 BST2Q10589 180 aaKnown RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 BAMBIQ13145 260 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 NAB1Q13506 487 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 AQP6Q13520 282 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 NFE2L1Q14494 772 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 RFTN1Q14699 578 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 MORF4L2Q15014 288 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 HERC3Q15034 1050 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 SMU1Q2TAY7 513 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 ITPRIPL2Q3MIP1 535 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 SLC36A3Q495N2 470 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 GTDC1Q4AE62 458 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 Q5BKY6 102 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 LRRC73Q5JTD7 316 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 BRMS1LQ5PSV4 323 aa2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.18□□□□□ -2.06
HMGB3P2-201ENST00000411913 UBE2UQ5VVX9 321 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms