RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 CDC14AQ9UNH5 594 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 RNF6Q9Y252 685 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 C5orf42Q9H799 3197 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 TRBV4-1A0A0J9YWV2 114 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 SH3PXD2BA1X283 911 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 HYKKA2RU49 373 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 FAM170BA6NMN3 283 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 CLCA1A8K7I4 914 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 B4DGG1 531 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 CYR61O00622 381 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 XPNPEP2O43895 674 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 OR10H3O60404 316 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 GASTP01350 101 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 EIF2S1P05198 315 aaKnown RBP7□□□□□ -1.29
CXCR4-202ENST00000409817 ALPPL2P10696 532 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 PVRP15151 417 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 GABRB1P18505 474 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 CCNA2P20248 432 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 PCSK6P29122 969 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 FMO3P31513 532 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 KRT20P35900 424 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 SIM1P81133 766 aaPredicted RBP7□□□□□ -1.29
CXCR4-202ENST00000409817 EMX1Q04741 257 aaPredicted RBP7□□□□□ -1.29
CXCR4-202ENST00000409817 C1orf61Q13536 156 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 FAM53BQ14153 422 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 LARS2Q15031 903 aaKnown RBP7□□□□□ -1.29
CXCR4-202ENST00000409817 PTGES3Q15185 160 aaKnown RBP7□□□□□ -1.29
CXCR4-202ENST00000409817 CYP27C1Q4G0S4 372 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 EIPR1Q53HC9 387 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 ZNF542PQ5EBM4 170 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 ZNF311Q5JNZ3 666 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 EXOSC6Q5RKV6 272 aaKnown RBP7□□□□□ -1.29
CXCR4-202ENST00000409817 ZBTB37Q5TC79 503 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 KLHL17Q6TDP4 642 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 SPATC1Q76KD6 591 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 ANKRD13BQ86YJ7 626 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 PEX5LQ8IYB4 626 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 CA13Q8N1Q1 262 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 ARL14Q8N4G2 192 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 CDRT4Q8N9R6 151 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 C7orf57Q8NEG2 295 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 OR7G2Q8NG99 324 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 APH1BQ8WW43 257 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 RLN3Q8WXF3 142 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 C16orf58Q96GQ5 468 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 Q96MT0 163 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 CSF3RQ99062 836 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 CD180Q99467 661 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 ARHGDIGQ99819 225 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 TPSD1Q9BZJ3 242 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 FKBP14Q9NWM8 211 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 CNOT2Q9NZN8 540 aaKnown RBP7□□□□□ -1.29
CXCR4-202ENST00000409817 CRIM1Q9NZV1 1036 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 FTSJ1Q9UET6 329 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 PSORS1C1Q9UIG5 152 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 FBXL21Q9UKT6 434 aa7□□□□□ -1.29
CXCR4-202ENST00000409817 MRPS33Q9Y291 106 aaKnown RBP7□□□□□ -1.29
CXCR4-202ENST00000409817 LMO7DNF2Z398 122 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 COQ9O75208 318 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 SEMA7AO75326 666 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 NME6O75414 186 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 WNT1P04628 370 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 PROS1P07225 676 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 ALOX5P09917 674 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 SLC35E2P0CK97 266 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 ST6GAL1P15907 406 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 CHMP24386 653 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 ACVR2AP27037 513 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 CTSKP43235 329 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 IDH2P48735 452 aaKnown RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 VSX2P58304 361 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 SNRPGP62308 76 aaKnown RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 ST3GAL3Q11203 375 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 DUSP8Q13202 625 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 BIKQ13323 160 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 SQSTM1Q13501 440 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 LTB4RQ15722 352 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 TBCEQ15813 527 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 PRTGQ2VWP7 1150 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 TCTE1Q5JU00 501 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 FHL5Q5TD97 284 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 SLX4IPQ5VYV7 408 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 C1orf94Q6P1W5 598 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 PGBD2Q6P3X8 592 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 OGFOD3Q6PK18 319 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 LINC00299Q6ZSB3 139 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 MCATQ8IVS2 390 aaKnown RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 ARHGEF39Q8N4T4 335 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 DNAJC22Q8N4W6 341 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 OR4D11Q8NGI4 311 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 OR6T1Q8NGN1 323 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 VANGL1Q8TAA9 524 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 C9orf43Q8TAL5 461 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-202ENST00000409817 SLC7A13Q8TCU3 470 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 FAR1Q8WVX9 515 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 KAT2AQ92830 837 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 SLC38A4Q969I6 547 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 CLDN23Q96B33 292 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 ZNF285Q96NJ3 590 aa6.99□□□□□ -1.29
CXCR4-202ENST00000409817 SLC38A3Q99624 504 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms