RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 TNFRSF10DQ9UBN6 386 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 MIA3Q5JRA6 1907 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 MASP2O00187 686 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 GYPBP06028 91 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 DLSTP36957 453 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 PDX1P52945 283 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 RAB38P57729 211 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 OR2B6P58173 313 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 DUSP5Q16690 384 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 XKR7Q5GH72 579 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 ASRGL1Q7L266 308 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 OR4N2Q8NGD1 307 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 OR4K13Q8NH42 304 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 ADAMTS16Q8TE57 1224 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 G6PC3Q9BUM1 346 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 UCK2Q9BZX2 261 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 MCCC2Q9HCC0 563 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 ZNF229Q9UJW7 825 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 LIPT1Q9Y234 373 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 PDCD11Q14690 1871 aaKnown RBP10.65□□□□□ -0.7
SNX13-202ENST00000409604 FAM25AB3EWG3 89 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 FAM25CB3EWG5 89 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 FAM25GB3EWG6 89 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 ARHGEF9O43307 516 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 B4GAT1O43505 415 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 FPR1P21462 350 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 SLC6A9P48067 706 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 LSSP48449 732 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 PMS2P3Q13401 168 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 DUSP7Q16829 419 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 OTPQ5XKR4 325 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 FAM71E1Q6IPT2 247 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 TMEM105Q8N8V8 129 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 TSPEARQ8WU66 669 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 COPS4Q9BT78 406 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 TWSG1Q9GZX9 223 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 KAT8Q9H7Z6 458 aaKnown RBP10.65□□□□□ -0.7
SNX13-202ENST00000409604 CLK4Q9HAZ1 481 aaKnown RBP10.65□□□□□ -0.7
SNX13-202ENST00000409604 PNPLA3Q9NST1 481 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 RIMS3Q9UJD0 308 aa10.65□□□□□ -0.7
SNX13-202ENST00000409604 IGF2RP11717 2491 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 A0A1W2PPK0 400 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 FAM183AA6NL82 134 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 EFCAB9A8MZ26 197 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 GALR3O60755 368 aaPredicted RBP10.65□□□□□ -0.71
SNX13-202ENST00000409604 BSGP35613 385 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 VASPP50552 380 aaPredicted RBP10.65□□□□□ -0.71
SNX13-202ENST00000409604 TRIP6Q15654 476 aaKnown RBP10.65□□□□□ -0.71
SNX13-202ENST00000409604 GGTA1PQ4G0N0 100 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 BROXQ5VW32 411 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 ESX1Q8N693 406 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 OR51G2Q8NGK0 314 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 THEM6Q8WUY1 208 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 MUC13Q9H3R2 512 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 SEMA4GQ9NTN9 838 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 ING3Q9NXR8 418 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 TMEM181Q9P2C4 612 aa10.65□□□□□ -0.71
SNX13-202ENST00000409604 AGAP14A8MT82 685 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 TOR1BO14657 336 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 PCDH17O14917 1159 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 LYNP07948 512 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 HBQ1P09105 142 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 CKMT1AP12532 417 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 ANXA8P13928 327 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 CAPGP40121 348 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 STARD6P59095 220 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 VLDLRP98155 873 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 RIPK1Q13546 671 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 GBX1Q14549 363 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 TRAM2Q15035 370 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 MRPL2Q5T653 305 aaKnown RBP10.64□□□□□ -0.71
SNX13-202ENST00000409604 PWWP2BQ6NUJ5 590 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 TMEM71Q6P5X7 295 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 PAQR7Q86WK9 346 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 ZNF671Q8TAW3 534 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 OR5B2Q96R09 309 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 MTHFD2LQ9H903 347 aaPredicted RBP10.64□□□□□ -0.71
SNX13-202ENST00000409604 NANSQ9NR45 359 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 CCM2LQ9NUG4 571 aaPredicted RBP10.64□□□□□ -0.71
SNX13-202ENST00000409604 SLC25A37Q9NYZ2 338 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 STMN3Q9NZ72 180 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 PDP2Q9P2J9 529 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 ACAD8Q9UKU7 415 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 CBLCQ9ULV8 474 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 SPINK2P20155 84 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 CPOXP36551 454 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 GCGRP47871 477 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 PHC1P78364 1004 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 ANKRD34AQ69YU3 496 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 VN1R4Q7Z5H5 301 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 ZCCHC7Q8N3Z6 543 aaKnown RBP10.64□□□□□ -0.71
SNX13-202ENST00000409604 BBS10Q8TAM1 723 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 SPG11Q96JI7 2443 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 FNDC1Q4ZHG4 1894 aaPredicted RBP10.64□□□□□ -0.71
SNX13-202ENST00000409604 LOC100130705A0A1B0GUX0 176 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 BRINP1O60477 761 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 CCDC159P0C7I6 412 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 ACVR2AP27037 513 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 RPS3AP61247 264 aaKnown RBP10.64□□□□□ -0.71
SNX13-202ENST00000409604 SLC14A1Q13336 389 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms