RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 CCNL2Q96S94 520 aaPredicted RBP20.33■□□□□ 0.85
EPCAM-202ENST00000405271 NXF5Q9H1B4 397 aaKnown RBP20.33■□□□□ 0.85
EPCAM-202ENST00000405271 POLE3Q9NRF9 147 aa20.33■□□□□ 0.85
EPCAM-202ENST00000405271 WDR70Q9NW82 654 aa20.33■□□□□ 0.85
EPCAM-202ENST00000405271 OR10H1Q9Y4A9 318 aa20.33■□□□□ 0.85
EPCAM-202ENST00000405271 TO15178 435 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 GUSBP08236 651 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 ACTR3P61158 418 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 ATP1A4Q13733 1029 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 KPNB1Q14974 876 aaKnown RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 PATL1Q86TB9 770 aaKnown RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 POP5Q969H6 163 aaKnown RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 RMND5BQ96G75 393 aaPredicted RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 SDF2Q99470 211 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 TREX2Q9BQ50 279 aaPredicted RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 ZNF350Q9GZX5 532 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 DENND2DQ9H6A0 471 aaPredicted RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 RYDENQ9NUL5 291 aaKnown RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 MRTO4Q9UKD2 239 aaKnown RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 CBLCQ9ULV8 474 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 ATMQ13315 3056 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 A0A0G2JPF8 293 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 AQP12BA6NM10 295 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 HNRNPCL2B2RXH8 293 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 HNRNPCL3B7ZW38 293 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 H0YHG0 523 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 STX11O75558 287 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 KCNK2O95069 426 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 PGM3O95394 542 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 H6PDO95479 791 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 CHRM4P08173 479 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 HNRNPCL4P0DMR1 293 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 KDELR2P33947 212 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 PIGAP37287 484 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 MRPS22P82650 360 aaKnown RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 ELOAQ14241 798 aaKnown RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 NNATQ16517 81 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 CRTC2Q53ET0 693 aaPredicted RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 CYP2R1Q6VVX0 501 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 AQP12AQ8IXF9 295 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 ZSCAN1Q8NBB4 408 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 SNRNP27Q8WVK2 155 aaKnown RBP20.32■□□□□ 0.84
EPCAM-202ENST00000405271 RNF145Q96MT1 663 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 G6PC3Q9BUM1 346 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 DEFB126Q9BYW3 111 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 RUBCNLQ9H714 662 aa20.32■□□□□ 0.84
EPCAM-202ENST00000405271 DSPPQ9NZW4 1301 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 CACNA1GO43497 2377 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 GXYLT2A0PJZ3 443 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 PRKNO60260 465 aaPredicted RBP20.31■□□□□ 0.84
EPCAM-202ENST00000405271 ETS2P15036 469 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 LRRC23Q53EV4 343 aaPredicted RBP20.31■□□□□ 0.84
EPCAM-202ENST00000405271 CRB2Q5IJ48 1285 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 RPS26P11Q5JNZ5 115 aaPredicted RBP20.31■□□□□ 0.84
EPCAM-202ENST00000405271 KRT73Q86Y46 540 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 EID3Q8N140 333 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 FAM110BQ8TC76 370 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 PMM1Q92871 262 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 ZNF607Q96SK3 696 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 SLC38A1Q9H2H9 487 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 OLAHQ9NV23 265 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 WDR45Q9Y484 360 aa20.31■□□□□ 0.84
EPCAM-202ENST00000405271 K7ENP7 123 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 IFNA14P01570 189 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 AQP1P29972 269 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 NR0B1P51843 470 aaKnown RBP20.3■□□□□ 0.84
EPCAM-202ENST00000405271 PSMD4P55036 377 aaKnown RBP20.3■□□□□ 0.84
EPCAM-202ENST00000405271 NRG3P56975 720 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 SRSF6Q13247 344 aaKnown RBP20.3■□□□□ 0.84
EPCAM-202ENST00000405271 DECR1Q16698 335 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.3■□□□□ 0.84
EPCAM-202ENST00000405271 AP1ARQ63HQ0 302 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 INO80CQ6PI98 192 aaPredicted RBP20.3■□□□□ 0.84
EPCAM-202ENST00000405271 CCDC81Q6ZN84 652 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 FRRS1Q6ZNA5 592 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 SPPL2CQ8IUH8 684 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 SLC34A3Q8N130 599 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 GOLM1Q8NBJ4 401 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 THAP4Q8WY91 577 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 FER1L6-AS2Q96M78 137 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 SAP130Q9H0E3 1048 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 RPS6KA6Q9UK32 745 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 SAMD4AQ9UPU9 718 aaKnown RBP20.3■□□□□ 0.84
EPCAM-202ENST00000405271 EML6Q6ZMW3 1958 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 MED13Q9UHV7 2174 aa20.3■□□□□ 0.84
EPCAM-202ENST00000405271 CDC14CA4D256 554 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 A8MUI8 341 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 SERPINA7P05543 415 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 ATP6V1C1P21283 382 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 CHAF1BQ13112 559 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 CCNIQ14094 377 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 CCNJQ5T5M9 372 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 TYW3Q6IPR3 259 aaKnown RBP20.29■□□□□ 0.84
EPCAM-202ENST00000405271 FIGNL1Q6PIW4 674 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 SPATA24Q86W54 205 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 C10orf67Q8IYJ2 551 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 TAGAPQ8N103 731 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 ZNF619Q8N2I2 560 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 BCORP1Q8N888 145 aa20.29■□□□□ 0.84
EPCAM-202ENST00000405271 OR4N2Q8NGD1 307 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms