RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PEX19P40855 299 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 KIR2DL3P43628 341 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 CLDN18P56856 261 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 VSNL1P62760 191 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 RPL38P63173 70 aaKnown RBP13.94□□□□□ -0.18
TPM1-207ENST00000403994 SRYQ05066 204 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 HSPB3Q12988 150 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 CYP27C1Q4G0S4 372 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 ZNF385BQ569K4 471 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 ANKRD26P1Q6NSI1 321 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 ZNF551Q7Z340 670 aaPredicted RBP13.94□□□□□ -0.18
TPM1-207ENST00000403994 TRABD2AQ86V40 505 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 RIBC1Q8N443 379 aaPredicted RBP13.94□□□□□ -0.18
TPM1-207ENST00000403994 BANPQ8N9N5 519 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 OR4K17Q8NGC6 315 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 NRGNQ92686 78 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 GFM2Q969S9 779 aaKnown RBP13.94□□□□□ -0.18
TPM1-207ENST00000403994 CIDECQ96AQ7 238 aaPredicted RBP13.94□□□□□ -0.18
TPM1-207ENST00000403994 ELP4Q96EB1 424 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 LRRC46Q96FV0 321 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 SFXN2Q96NB2 322 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 LMF2Q9BU23 707 aaKnown RBP13.94□□□□□ -0.18
TPM1-207ENST00000403994 MECRQ9BV79 373 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 Q9N2J8 555 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 PPP4R1LQ9P1A2 415 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 LGALS13Q9UHV8 139 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 CBLCQ9ULV8 474 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 DNAJC15Q9Y5T4 150 aa13.94□□□□□ -0.18
TPM1-207ENST00000403994 FLNAP21333 2647 aaKnown RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 TLDC2A0PJX2 215 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 CLCA1A8K7I4 914 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 LSM1O15116 133 aaKnown RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 FADS1O60427 444 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 CTAG2O75638 210 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 CHEK2O96017 543 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 CHRNGP07510 517 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 TMIGD3P0DMS9 266 aaPredicted RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 ZNF708P17019 499 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 CTSSP25774 331 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 DPP4P27487 766 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 OPRM1P35372 400 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 AGFG1P52594 562 aaKnown RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 STX5Q13190 355 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 PDE7AQ13946 482 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 ZNHIT3Q15649 155 aaPredicted RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 DECR1Q16698 335 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 FLYWCH1Q4VC44 716 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 AAGABQ6PD74 315 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 PLXDC2Q6UX71 529 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 Q6ZSR9 355 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 FADS6Q8N9I5 356 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 CLHC1Q8NHS4 586 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 ZFP3Q96NJ6 502 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 TSSK3Q96PN8 268 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 GPATCH1Q9BRR8 931 aaKnown RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 EQTNQ9NQ60 294 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 FAM120CQ9NX05 1096 aaKnown RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 SLC17A7Q9P2U7 560 aa13.93□□□□□ -0.18
TPM1-207ENST00000403994 FOXD3Q9UJU5 478 aaPredicted RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 RPH3AQ9Y2J0 694 aaPredicted RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 ZNF469Q96JG9 3925 aaPredicted RBP13.93□□□□□ -0.18
TPM1-207ENST00000403994 ABCA4P78363 2273 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 PCNX3Q9H6A9 2034 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 AKAP10O43572 662 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 ZIC3O60481 467 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 NPHS1O60500 1241 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 IL33O95760 270 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 IL18BPO95998 194 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 LINC00032P0C843 101 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 CHMP24386 653 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 ALDH3A1P30838 453 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 STARP49675 285 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 DGKQP52824 942 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 DSCR4P56555 118 aaPredicted RBP13.92□□□□□ -0.18
TPM1-207ENST00000403994 B3GALT5-AS1P59052 145 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 FOXF2Q12947 444 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 GAB1Q13480 694 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 RFTN2Q52LD8 501 aaPredicted RBP13.92□□□□□ -0.18
TPM1-207ENST00000403994 SPNS3Q6ZMD2 512 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 GCNT2Q8N0V5 402 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 OR2M3Q8NG83 312 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 TWIST2Q8WVJ9 160 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 PPCDCQ96CD2 204 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 UCN2Q96RP3 112 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 TM9SF2Q99805 663 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 SFXN3Q9BWM7 321 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 RTN4RQ9BZR6 473 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 DNAJB12Q9NXW2 375 aaKnown RBP13.92□□□□□ -0.18
TPM1-207ENST00000403994 JKAMPQ9P055 326 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 TMED5Q9Y3A6 229 aa13.92□□□□□ -0.18
TPM1-207ENST00000403994 ZFHX3Q15911 3703 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 MPDZO75970 2070 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 GXYLT2A0PJZ3 443 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 PIP5K1BO14986 540 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 HCRTR2O43614 444 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 TBX19O60806 448 aa13.91□□□□□ -0.18
TPM1-207ENST00000403994 DNAJA1P31689 397 aaKnown RBP13.91□□□□□ -0.18
TPM1-207ENST00000403994 GPC1P35052 558 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms