RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 ALPK1Q96QP1 1244 aa12.19□□□□□ -0.46
NDEL1-203ENST00000402554 CMKLR1Q99788 373 aa12.19□□□□□ -0.46
NDEL1-203ENST00000402554 GRIP2Q9C0E4 1043 aa12.19□□□□□ -0.46
NDEL1-203ENST00000402554 PIGUQ9H490 435 aa12.19□□□□□ -0.46
NDEL1-203ENST00000402554 TRIM45Q9H8W5 580 aaPredicted RBP12.19□□□□□ -0.46
NDEL1-203ENST00000402554 TUBA8Q9NY65 449 aaPredicted RBP12.19□□□□□ -0.46
NDEL1-203ENST00000402554 RHCGQ9UBD6 479 aa12.19□□□□□ -0.46
NDEL1-203ENST00000402554 PCDHGA8Q9Y5G5 932 aa12.19□□□□□ -0.46
NDEL1-203ENST00000402554 TRIM64A6NGJ6 449 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 EFCAB7A8K855 629 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 TMEM150CB9EJG8 249 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 H0YIG0 161 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 TMX2-CTNND1H3BSU7 103 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 CLDN4O14493 209 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 FFAR1O14842 300 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 PCDH17O14917 1159 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 OR2B3O76000 313 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 LGI1O95970 557 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 ALOX5P09917 674 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 PABPC4LP0CB38 370 aaKnown RBP12.18□□□□□ -0.46
NDEL1-203ENST00000402554 RYKP34925 604 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 CLK3P49761 638 aaKnown RBP12.18□□□□□ -0.46
NDEL1-203ENST00000402554 DUSP5Q16690 384 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 ARHGAP11BQ3KRB8 267 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 ZNF311Q5JNZ3 666 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 MLIPQ5VWP3 458 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 FOXB2Q5VYV0 432 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 PRSS42Q7Z5A4 293 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 ARHGAP22Q7Z5H3 698 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 HMGN2P46Q86SG4 172 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 SATL1Q86VE3 508 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 RBM45Q8IUH3 476 aaKnown RBP12.18□□□□□ -0.46
NDEL1-203ENST00000402554 LACC1Q8IV20 430 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 D2HGDHQ8N465 521 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 METTL27Q8N6F8 245 aaPredicted RBP12.18□□□□□ -0.46
NDEL1-203ENST00000402554 CDRT4Q8N9R6 151 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 SETD9Q8NE22 299 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 OR4D11Q8NGI4 311 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 CTHRC1Q96CG8 243 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 DPYSL5Q9BPU6 564 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 PSD2Q9BQI7 771 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 PRTFDC1Q9NRG1 225 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 PAPOLBQ9NRJ5 636 aaKnown RBP12.18□□□□□ -0.46
NDEL1-203ENST00000402554 FOXJ2Q9P0K8 574 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 SEMA5BQ9P283 1151 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 DKK4Q9UBT3 224 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 SLC13A4Q9UKG4 626 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 GMPPBQ9Y5P6 360 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 SCN2AQ99250 2005 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 ZZEF1O43149 2961 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 APC2O95996 2303 aa12.18□□□□□ -0.46
NDEL1-203ENST00000402554 CDRT15L2A8MXV6 281 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 M0R3H8 397 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 SYT5O00445 386 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 DXOO77932 396 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 H1F0P07305 194 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 CT62P0C5K7 136 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 ELK4P28324 431 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 CSTF2P33240 577 aaKnown RBP eCLIP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 CDH15P55291 814 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 SMIM11AP58511 58 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 ISL1P61371 349 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 CD47Q08722 323 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 MAP4K2Q12851 820 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 NPRL3Q12980 569 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 EIF3IQ13347 325 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 TRA2AQ13595 282 aaKnown RBP eCLIP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 EXOSC7Q15024 291 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 SYT16Q17RD7 645 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 EXOSC6Q5RKV6 272 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 RBM48Q5RL73 367 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 COMTD1Q86VU5 262 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 KMT5CQ86Y97 462 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 VWA5B2Q8N398 1253 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 AGBL5Q8NDL9 886 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 HDAC2Q92769 488 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 SLC41A2Q96JW4 573 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 DHRS1Q96LJ7 313 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 STACQ99469 402 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 CTRCQ99895 268 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 APOL4Q9BPW4 351 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 WFDC6Q9BQY6 131 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 GABARAPL3Q9BY60 117 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 QRSL1Q9H0R6 528 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 MTHFD2LQ9H903 347 aaPredicted RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 ZNF556Q9HAH1 456 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 NMNAT1Q9HAN9 279 aaPredicted RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 CACYBPQ9HB71 228 aaKnown RBP12.17□□□□□ -0.46
NDEL1-203ENST00000402554 ENAMQ9NRM1 1142 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 CUTCQ9NTM9 273 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 RLIMQ9NVW2 624 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 NDUFA13Q9P0J0 144 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 TMCC3Q9ULS5 477 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 POFUT2Q9Y2G5 429 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 CCDC88CQ9P219 2028 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 SMIM31A0A1B0GVY4 71 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 ARRDC5A6NEK1 342 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 C9orf172C9J069 976 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 FCMRO60667 390 aa12.17□□□□□ -0.46
NDEL1-203ENST00000402554 COQ9O75208 318 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms