RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 LRIG1Q96JA1 1093 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 PRTFDC1Q9NRG1 225 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 ATXN7L1Q9ULK2 861 aaPredicted RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 ARPC1BO15143 372 aaKnown RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 SYT7O43581 403 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 OR12D1P0DN82 309 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 HLA-DOBP13765 273 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 LMO2P25791 158 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 SOX3P41225 446 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 ID2Q02363 134 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 CHRNA6Q15825 494 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 CCL14Q16627 93 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 ARSIQ5FYB1 569 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 AVPI1Q5T686 147 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 DPPA2Q7Z7J5 298 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 GKN2Q86XP6 184 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 TFGQ92734 400 aaPredicted RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 ST6GALNAC5Q9BVH7 336 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 KLHL42Q9P2K6 505 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 SH3BGRL2Q9UJC5 107 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 GJD2Q9UKL4 321 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 CFAP20Q9Y6A4 193 aaKnown RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 HSPE1-MOB4S4R3N1 261 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 A0A1W2PQL4 384 aaPredicted RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 RTCAO00442 366 aaKnown RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 DVL2O14641 736 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 DHPSP49366 369 aaPredicted RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 NDUFA6P56556 154 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 ATPAF1Q5TC12 328 aaPredicted RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 RBMS3Q6XE24 437 aaKnown RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 LANCL3Q6ZV70 420 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 SLC24A5Q71RS6 500 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 CPNE8Q86YQ8 564 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 FAM109AQ8N4B1 249 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 OR6T1Q8NGN1 323 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 OR2T4Q8NH00 348 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 TRMT2BQ96GJ1 504 aaKnown RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 PRRT1Q99946 306 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 RNF11Q9Y3C5 154 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 KLF11O14901 512 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 B3GALNT1O75752 331 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 SYPP08247 313 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 ALPIP09923 528 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 HOXD12P35452 270 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 CRYZQ08257 329 aaKnown RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 MGAT3Q09327 533 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 FBXL18Q96ME1 805 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 PLEKHJ1Q9NW61 149 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 DTLQ9NZJ0 730 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 C2CD4BA6NLJ0 364 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 A8MVM7 634 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 POP7O75817 140 aaKnown RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 FCER1GP30273 86 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 MEF2DQ14814 521 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 AGTRAPQ6RW13 159 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 ZNF783Q6ZMS7 281 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 SGK3Q96BR1 496 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 BMFQ96LC9 184 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 DEFB118Q96PH6 123 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 PITHD1Q9GZP4 211 aaPredicted RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 MINDY3Q9H8M7 445 aa13.17□□□□□ -0.3
RERE-204ENST00000400908 GPN2Q9H9Y4 310 aaPredicted RBP13.17□□□□□ -0.3
RERE-204ENST00000400908 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 C17orf112F2Z3M2 114 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 LDB2O43679 373 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 METTL15P1P0C7V9 234 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 PLCXD2Q0VAA5 305 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 SF3A2Q15428 464 aaKnown RBP13.16□□□□□ -0.3
RERE-204ENST00000400908 SLC7A5P1Q8MH63 180 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 CD99L2Q8TCZ2 262 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 ACDQ96AP0 544 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 TBC1D20Q96BZ9 403 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 DERL2Q9GZP9 239 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 MYH6P13533 1939 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 A0A087WZY1 265 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 J3KR12 359 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 MTX2O75431 263 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 MTNR1AP48039 350 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 KCNC3Q14003 757 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 OR5D16Q8NGK9 328 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 CDH20Q9HBT6 801 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 EBF1Q9UH73 591 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 GMEB2Q9UKD1 530 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 LIPT1Q9Y234 373 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 TRIM23P36406 574 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 DAOAP59103 153 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 ADARB1P78563 741 aaKnown RBP13.16□□□□□ -0.3
RERE-204ENST00000400908 OR56B4Q8NH76 319 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 C2orf15Q8WU43 125 aaKnown RBP13.16□□□□□ -0.3
RERE-204ENST00000400908 A0A096LPI6 279 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 ACOT7O00154 380 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 TRAF3IP2O43734 574 aaPredicted RBP13.16□□□□□ -0.3
RERE-204ENST00000400908 MPIG6BO95866 241 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 NFYAP23511 347 aaPredicted RBP13.16□□□□□ -0.3
RERE-204ENST00000400908 MRPS10P82664 201 aaKnown RBP13.16□□□□□ -0.3
RERE-204ENST00000400908 NPRL3Q12980 569 aa13.16□□□□□ -0.3
RERE-204ENST00000400908 RAET1LQ5VY80 246 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms