RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 BCORQ6W2J9 1755 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ARAP2Q8WZ64 1704 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 SULT1C2O00338 296 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 UCHL1P09936 223 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 PTPN6P29350 595 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 MARCH8Q5T0T0 291 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 LETMD1Q6P1Q0 360 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 GLYATL2Q8WU03 294 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 L3HYPDHQ96EM0 354 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 WDR77Q9BQA1 342 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 MRI1Q9BV20 369 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ATG5Q9H1Y0 275 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF442Q9H7R0 627 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 KCNK6Q9Y257 313 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 TMEM98Q9Y2Y6 226 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 HMX3A6NHT5 357 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 EEF1E1-BLOC1S5C9J1V9 151 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 MMP20O60882 483 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 GPR4P46093 362 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 HSD17B7P56937 341 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ERVK-16P61578 105 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 RAB30Q15771 203 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 PLEKHS1Q5SXH7 462 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF783Q6ZMS7 281 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 MRPL10Q7Z7H8 261 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 BOLLQ8N9W6 283 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 OR5H6Q8NGV6 325 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 AUTS2Q8WXX7 1259 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 DNAJA3Q96EY1 480 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 PRTFDC1Q9NRG1 225 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ABRACLQ9P1F3 81 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 OARD1Q9Y530 152 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 TUBGCP6Q96RT7 1819 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 A0A1B0GV50 99 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 TRAPPC13A5PLN9 417 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 M0QZQ0 153 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 MPPED1O15442 326 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 SPDEFO95238 335 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 RIDAP52758 137 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 NKX3-2P78367 333 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF616Q08AN1 781 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 TMEM35AQ53FP2 167 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 KRBOX4Q5JUW0 171 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 IER5LQ5T953 404 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 LIPJQ5W064 366 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ARHGAP11AQ6P4F7 1023 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ZC3H14Q6PJT7 736 aaKnown RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 TRIM46Q7Z4K8 759 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 ACVR1CQ8NER5 493 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 OR9A4Q8NGU2 314 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 RNF128Q8TEB7 428 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 DOK4Q8TEW6 326 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 IRF7Q92985 503 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 RAB39BQ96DA2 213 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 SLC25A44Q96H78 314 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 TRIB3Q96RU7 358 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 TXN2Q99757 166 aa8.42□□□□□ -1.06
PTPRM-202ENST00000400053 PCYT1BQ9Y5K3 369 aaPredicted RBP8.42□□□□□ -1.06
PTPRM-202ENST00000400053 PAPPAQ13219 1627 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 CCDC85CA6NKD9 419 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 SOCS7O14512 581 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 ADH1BP00325 375 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 GALTP07902 379 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 GRPRP30550 384 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 TNFSF8P32971 234 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 PTH2RP49190 550 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 PTPRRQ15256 657 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 SGCAQ16586 387 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 SLC22A10Q63ZE4 541 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 NIPAL3Q6P499 406 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF100Q8IYN0 542 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 NAGSQ8N159 534 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 PARP16Q8N5Y8 322 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 IL17RCQ8NAC3 791 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 KLHDC7BQ96G42 594 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 PRDM9Q9NQV7 894 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 TEX10Q9NXF1 929 aaPredicted RBP8.41□□□□□ -1.06
PTPRM-202ENST00000400053 PPP1R14DQ9NXH3 145 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 B3GNT3Q9Y2A9 372 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 DDX60LQ5H9U9 1706 aaKnown RBP8.41□□□□□ -1.06
PTPRM-202ENST00000400053 LOC102723532A0A0G2JNH3 316 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 ANHXE9PGG2 379 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 TSPAN6O43657 245 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 SSTR2P30874 369 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 ELOCQ15369 112 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 CDNFQ49AH0 187 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 FLYWCH1Q4VC44 716 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 ERN2Q76MJ5 926 aaKnown RBP8.41□□□□□ -1.06
PTPRM-202ENST00000400053 OTOP2Q7RTS6 562 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 NRARPQ7Z6K4 114 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 LRRTM3Q86VH5 581 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 METTL4Q8N3J2 472 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 C3orf58Q8NDZ4 430 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 OR4E2Q8NGC2 313 aa8.41□□□□□ -1.06
PTPRM-202ENST00000400053 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTPRM-202ENST00000400053 PCNPQ8WW12 178 aaKnown RBP8.41□□□□□ -1.06
PTPRM-202ENST00000400053 RAB7BQ96AH8 199 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms