RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CCR6P51684 374 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 TCTN1Q2MV58 587 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 HBMQ6B0K9 141 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 ZNF322Q6U7Q0 402 aaPredicted RBP13.12□□□□□ -0.31
APOB-202ENST00000399256 PLEKHM3Q6ZWE6 761 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 LINC00471Q8N535 108 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 OR51G2Q8NGK0 314 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 GNPDA2Q8TDQ7 276 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 POF1BQ8WVV4 589 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 MTG2Q9H4K7 406 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 ASB6Q9NWX5 421 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 TEX10Q9NXF1 929 aaPredicted RBP13.12□□□□□ -0.31
APOB-202ENST00000399256 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
APOB-202ENST00000399256 TSPAN4O14817 238 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 TOXO94900 526 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 CFDP00746 253 aaPredicted RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 RB1P06400 928 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 CHRM4P08173 479 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 ALPPL2P10696 532 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 PCBP4P57723 403 aaKnown RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 VSX2P58304 361 aaPredicted RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 CRYZQ08257 329 aaKnown RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 AADACL4Q5VUY2 407 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 SMARCD3Q6STE5 483 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 TRAPPC5Q8IUR0 188 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 LRRC56Q8IYG6 542 aaPredicted RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 SIRT6Q8N6T7 355 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 OR2A12Q8NGT7 310 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 ZFPM2Q8WW38 1151 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 RFKQ969G6 155 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 UBL7Q96S82 380 aaPredicted RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 ELAC1Q9H777 363 aaKnown RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 CACNB4O00305 520 aaPredicted RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 LEFTY1O75610 366 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 ACSL1P33121 698 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 FZD5Q13467 585 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 COL9A2Q14055 689 aaPredicted RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 PRAMEF14Q5SWL7 426 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 PRAMEF13Q5VWM6 474 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 CD276Q5ZPR3 534 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 SYNDIG1Q9H7V2 258 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 ZCCHC3Q9NUD5 404 aaKnown RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 AHSPQ9NZD4 102 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 UBQLN2Q9UHD9 624 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 CBLCQ9ULV8 474 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 ITM2BQ9Y287 266 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 ZC3H12DA2A288 527 aaKnown RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 SURF4O15260 269 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 IFNA7P01567 189 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 DNASE1P24855 282 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 RBMS1P29558 406 aaKnown RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 GPR4P46093 362 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 RPL6Q02878 288 aaKnown RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 GRK1Q15835 563 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 PIP5KL1Q5T9C9 394 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 KHDRBS2Q5VWX1 349 aaKnown RBP13.11□□□□□ -0.31
APOB-202ENST00000399256 C11orf96Q7Z7L8 435 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 OAFQ86UD1 273 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 AUTS2Q8WXX7 1259 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 NACC2Q96BF6 587 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 RBP7Q96R05 134 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 FAM83CQ9BQN1 747 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 TMEM175Q9BSA9 504 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 TNFRSF10DQ9UBN6 386 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 LIPT1Q9Y234 373 aa13.11□□□□□ -0.31
APOB-202ENST00000399256 FEZF1A0PJY2 475 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 TMPRSS11DO60235 418 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 GABRR2P28476 465 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 THBS2P35442 1172 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 BSGP35613 385 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 MTNR1BP49286 362 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 HSF2Q03933 536 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 TSPAN31Q12999 210 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 GALEQ14376 348 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 ST3GAL2Q16842 350 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 CLLU1Q5K131 121 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 MTFR2Q6P444 385 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 CHMP1BQ7LBR1 199 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 RRM2BQ7LG56 351 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 OR52N1Q8NH53 320 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 UBE2E3Q969T4 207 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 LMLNQ96KR4 655 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 OR2M2Q96R28 347 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 SEMA4GQ9NTN9 838 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 SCML1Q9UN30 329 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 NTNG1Q9Y2I2 539 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 MRPS7Q9Y2R9 242 aaKnown RBP13.1□□□□□ -0.31
APOB-202ENST00000399256 NUBP2Q9Y5Y2 271 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 SSNA1O43805 119 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 TSPAN9O75954 239 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 SOX30O94993 753 aa13.1□□□□□ -0.31
APOB-202ENST00000399256 HRGP04196 525 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms