RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 FAM26DQ5JW98 314 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 TMEM69Q5SWH9 247 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 BHLHE41Q9C0J9 482 aaPredicted RBP13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 RDH14Q9HBH5 336 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 ACTR10Q9NZ32 417 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 FOCADQ5VW36 1801 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 C13orf42A0A1B0GVH6 325 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 GASTP01350 101 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 PSMA3P25788 255 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 BMPR1AP36894 532 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 GCGRP47871 477 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 MAP4K2Q12851 820 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 DUSP7Q16829 419 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 OR4E2Q8NGC2 313 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 ST6GAL2Q96JF0 529 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 C7orf34Q96L11 122 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 KCNK12Q9HB15 430 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 RLIMQ9NVW2 624 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 PTTG3PQ9NZH4 202 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 TMEFF2Q9UIK5 374 aaPredicted RBP13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 MSRAQ9UJ68 235 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 QSER1Q2KHR3 1735 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 HYKKA2RU49 373 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 SGCEO43556 437 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 GMFGO60234 142 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 CSO75390 466 aaKnown RBP13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 SNAPC5O75971 98 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 CSF3P09919 207 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 EPCAMP16422 314 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 UQCRC2P22695 453 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 MC2RQ01718 297 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 CRYZQ08257 329 aaKnown RBP13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 HLA-DQA1Q5Y7H0 255 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF627Q7L945 461 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 KANSL1Q7Z3B3 1105 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 COMMD6Q7Z4G1 85 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 ZSCAN1Q8NBB4 408 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 GNPDA2Q8TDQ7 276 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 GIMAP1Q8WWP7 306 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 CHMP1AQ9HD42 196 aaPredicted RBP13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 NEUROD4Q9HD90 331 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 WASH6PQ9NQA3 447 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 GNG8Q9UK08 70 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 SNX11Q9Y5W9 270 aa13.8□□□□□ -0.2
RPRD1A-202ENST00000399022 BRWD3Q6RI45 1802 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 METTL21EPA6NDL7 271 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 TOR1AO14656 332 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 RBBP9O75884 186 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 B3GALT4O96024 378 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CTSAP10619 480 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 C6P13671 934 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CSNK2A2P19784 350 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 ACVR2AP27037 513 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 RORAP35398 523 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 SOX2P48431 317 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 WDR5P61964 334 aaKnown RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 MC1RQ01726 317 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 KCNC3Q14003 757 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 METTL11BQ5VVY1 283 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF551Q7Z340 670 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CCDC190Q86UF4 302 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF676Q8N7Q3 588 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 TMEM185AQ8NFB2 350 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 S100PBPQ96BU1 408 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 OTUB2Q96DC9 234 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 SPACA7Q96KW9 195 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CD180Q99467 661 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 F8W036 122 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC16A5O15375 505 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 KRT33AO76009 404 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 PCMT1P22061 227 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 PDHA2P29803 388 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 MMP12P39900 470 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 BLOC1S1P78537 153 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 HOXC5Q00444 222 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 FGL2Q14314 439 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 GAREM2Q75VX8 874 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 SSX6Q7RTT6 188 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CBARPQ8N350 705 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CASTOR1Q8WTX7 329 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 DCLRE1CQ96SD1 692 aaKnown RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 ALOXE3Q9BYJ1 711 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CIB4A0PJX0 185 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 M0R3H8 397 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 FARS2O95363 451 aaKnown RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 HIST1H2ABP04908 130 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 HMGA1P17096 107 aaKnown RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CD9P21926 228 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 KIR2DL3P43628 341 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 TAS2R43P59537 309 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 IFITM2Q01629 132 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF33BQ06732 778 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 SEC23BQ15437 767 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 POMZP3Q6PJE2 187 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 HIST3H2AQ7L7L0 130 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 DOK4Q8TEW6 326 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 CNOT9Q92600 299 aaKnown RBP13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 HIST1H2ACQ93077 130 aa13.79□□□□□ -0.2
RPRD1A-202ENST00000399022 MFFQ9GZY8 342 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms