RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RPS6P62753 249 aaKnown RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 NOP14P78316 857 aaKnown RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 GSTO1P78417 241 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 MS4A2Q01362 244 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ELP6Q0PNE2 266 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 EIF2B1Q14232 305 aaKnown RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 LTB4RQ15722 352 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ZIC1Q15915 447 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 MICAQ29983 383 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 TMEM44Q2T9K0 475 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 MS4A13Q5J8X5 152 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 NHLRC3Q5JS37 347 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 BTNL3Q6UXE8 466 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 CENPUQ71F23 418 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 TSEN54Q7Z6J9 526 aaKnown RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 ANKRD37Q7Z713 158 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 HSCBQ8IWL3 235 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 CENPLQ8N0S6 344 aaPredicted RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 CENPSQ8N2Z9 138 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ARL6IP6Q8N6S5 226 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 STKLD1Q8NE28 680 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 GMCL1P1Q8NEA9 526 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 OR10T2Q8NGX3 314 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 OR4Q3Q8NH05 313 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 RAB7BQ96AH8 199 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 DNAJA3Q96EY1 480 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 PIWIL1Q96J94 861 aaKnown RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 TBCDQ9BTW9 1192 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ZNF416Q9BWM5 594 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 TBC1D10AQ9BXI6 508 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 COMMD4Q9H0A8 199 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 RIBC2Q9H4K1 309 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 RNF41Q9H4P4 317 aaPredicted RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 CALHM2Q9HA72 323 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ADGRL4Q9HBW9 690 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 RPS10P5Q9NQ39 176 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 IMPAD1Q9NX62 359 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 DUS2Q9NX74 493 aaKnown RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 CYTH4Q9UIA0 394 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 LAMP5Q9UJQ1 280 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 NTNG1Q9Y2I2 539 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ABCA7Q8IZY2 2146 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 A0A1B0GTH9 108 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 ZNF487B1APH4 448 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 C11orf98E9PRG8 122 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 K7ERI5 159 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 SLC17A2O00624 439 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 MAPK13O15264 365 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 SH3BGRLO75368 114 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 IDH1O75874 414 aaKnown RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 JCHAINP01591 159 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 FAM200BP0CF97 657 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 CT45A10P0DMU9 189 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 PVRP15151 417 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 GATA1P15976 413 aaPredicted RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 H2AFXP16104 143 aaPredicted RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 CAPN2P17655 700 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 TSPAN8P19075 237 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 DRD5P21918 477 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 OTX2P32243 289 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 SOX6P35712 828 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 PTGER3P43115 390 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 METAP1P53582 386 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 NAPAP54920 295 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 RAG2P55895 527 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 CSTF1Q05048 431 aaKnown RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 RAB35Q15286 201 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 TRIP10Q15642 601 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 BEND6Q5SZJ8 279 aaPredicted RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 LEMD1Q68G75 181 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 ASPHD2Q6ICH7 369 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 GALNT17Q6IS24 598 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 SLC25A24Q6NUK1 477 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 REG3GQ6UW15 175 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 ZNF600Q6ZNG1 722 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 Q7L0L9 218 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 MARCH9Q86YJ5 346 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 GRAMD2AQ8IUY3 354 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 ZNF540Q8NDQ6 660 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 OR6T1Q8NGN1 323 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 OR2T34Q8NGX1 318 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 OR52J3Q8NH60 311 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 NANPQ8TBE9 248 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 TBCKQ8TEA7 893 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 ART4Q93070 314 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 TOMM40LQ969M1 308 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 UPRTQ96BW1 309 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 RBM18Q96H35 190 aaKnown RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 FOXN4Q96NZ1 517 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 SOSTQ9BQB4 213 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 RPP25Q9BUL9 199 aaKnown RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 SLC25A51Q9H1U9 297 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 OPN3Q9H1Y3 402 aaPredicted RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 RBM28Q9NW13 759 aaKnown RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 EHFQ9NZC4 300 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 RCOR3Q9P2K3 495 aaPredicted RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 BARX2Q9UMQ3 279 aaPredicted RBP2.12□□□□□ -2.07
CD47-203ENST00000398258 DUSP12Q9UNI6 340 aa2.12□□□□□ -2.07
CD47-203ENST00000398258 CHMP2BQ9UQN3 213 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms