RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 OR5M3Q8NGP4 307 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 TSPEARQ8WU66 669 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 PIK3R3Q92569 461 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 RELTQ969Z4 430 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 AURKBQ96GD4 344 aaPredicted RBP23.36■■□□□ 1.33
U2AF1-203ENST00000398137 MYLK2Q9H1R3 596 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 KLHL1Q9NR64 748 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 NDUFAF1Q9Y375 327 aa23.36■■□□□ 1.33
U2AF1-203ENST00000398137 SLC25A12O75746 678 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 NKX2-2O95096 273 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 UNC5CO95185 931 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 CRYABP02511 175 aaKnown RBP23.35■■□□□ 1.33
U2AF1-203ENST00000398137 KRT16P08779 473 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 FBXW4P57775 412 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 RTL4Q6ZR62 310 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 HORMAD2Q8N7B1 307 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 COX18Q8N8Q8 333 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 OR5D16Q8NGK9 328 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 PNPT1Q8TCS8 783 aaKnown RBP23.35■■□□□ 1.33
U2AF1-203ENST00000398137 RMND5BQ96G75 393 aaPredicted RBP23.35■■□□□ 1.33
U2AF1-203ENST00000398137 CCDC106Q9BWC9 280 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 SLAMF8Q9P0V8 285 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 CBLCQ9ULV8 474 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 CACNA1DQ01668 2161 aa23.35■■□□□ 1.33
U2AF1-203ENST00000398137 CELSR2Q9HCU4 2923 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 FBP2O00757 339 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 CDK2AP1O14519 115 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 PPM1BO75688 479 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 ZCCHC18P0CG32 403 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 HOXB9P17482 250 aaPredicted RBP23.34■■□□□ 1.33
U2AF1-203ENST00000398137 MATN1P21941 496 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 MAN2A2P49641 1150 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 TMED10P49755 219 aaKnown RBP23.34■■□□□ 1.33
U2AF1-203ENST00000398137 CYP27C1Q4G0S4 372 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 TNFAIP8L2Q6P589 184 aaPredicted RBP23.34■■□□□ 1.33
U2AF1-203ENST00000398137 MDGA2Q7Z553 956 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 RNF130Q86XS8 419 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 TREML1Q86YW5 311 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 POU5F2Q8N7G0 328 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 OR10G3Q8NGC4 313 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 ADAMTS15Q8TE58 950 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 ZFP90Q8TF47 636 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 CDS1Q92903 461 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 FRMD6Q96NE9 622 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 PHF12Q96QT6 1004 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 OR7D2Q96RA2 312 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 OR51I1Q9H343 314 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 SLC25A37Q9NYZ2 338 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 SEC14L3Q9UDX4 400 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 PCDHB14Q9Y5E9 798 aa23.34■■□□□ 1.33
U2AF1-203ENST00000398137 LOC100653049A0A140TA62 436 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 CAPN14A8MX76 684 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 REM1O75628 298 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 KRT34O76011 436 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 KCNH1O95259 989 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 CD46P15529 392 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 IL12BP29460 328 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 KRT20P35900 424 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 RFX3P48380 749 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 KHKP50053 298 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 PSPHP78330 225 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 NTRK2Q16620 822 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 LRIF1Q5T3J3 769 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 DESI1Q6ICB0 168 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 GALNTL5Q7Z4T8 443 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 DHDDSQ86SQ9 333 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 MSRB3Q8IXL7 192 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 DND1Q8IYX4 353 aaKnown RBP23.33■■□□□ 1.33
U2AF1-203ENST00000398137 CCDC197Q8NCU1 140 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 TMEM125Q96AQ2 219 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 EFHD2Q96C19 240 aaPredicted RBP23.33■■□□□ 1.33
U2AF1-203ENST00000398137 SLC35A4Q96G79 324 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 STACQ99469 402 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 PIGUQ9H490 435 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 TIMMDC1Q9NPL8 285 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 RYDENQ9NUL5 291 aaKnown RBP23.33■■□□□ 1.33
U2AF1-203ENST00000398137 KCNE3Q9Y6H6 103 aa23.33■■□□□ 1.33
U2AF1-203ENST00000398137 TEX15Q9BXT5 2789 aa23.33■■□□□ 1.32
U2AF1-203ENST00000398137 A0A1B0GUH1 482 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 NDUFAB1O14561 156 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 SP1P08047 785 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 CCL3P10147 92 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 NAGAP17050 411 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 PIGAP37287 484 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 MRPS22P82650 360 aaKnown RBP23.32■■□□□ 1.32
U2AF1-203ENST00000398137 NFYCQ13952 458 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 CYLC2Q14093 348 aaPredicted RBP23.32■■□□□ 1.32
U2AF1-203ENST00000398137 DECR1Q16698 335 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 REP15Q6BDI9 236 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 GALNT10Q86SR1 603 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 DPP10Q8N608 796 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 GOLM1Q8NBJ4 401 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 PSD4Q8NDX1 1056 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 MIPOL1Q8TD10 442 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 SGCZQ96LD1 299 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 ADOQ96SZ5 270 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 TPT1P8Q9HAU6 139 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 IL1RL2Q9HB29 575 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 DUSP22Q9NRW4 184 aa23.32■■□□□ 1.32
U2AF1-203ENST00000398137 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms