RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 FAM149AA5PLN7 773 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 AGAP5A6NIR3 686 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 PABPC4LP0CB38 370 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 NOVA1P51513 510 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 PUM1Q14671 1186 aaKnown RBP eCLIP18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 CYP27C1Q4G0S4 372 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 CCNJQ5T5M9 372 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 LPCAT4Q643R3 524 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 PAPD4Q6PIY7 484 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 C9orf40Q8IXQ3 194 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 ZNF619Q8N2I2 560 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 ESX1Q8N693 406 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 ZNF441Q8N8Z8 693 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 APCDD1LQ8NCL9 501 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 CT55Q8WUE5 264 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 RMND5BQ96G75 393 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 LPAR4Q99677 370 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 BDH2Q9BUT1 245 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 PINK1Q9BXM7 581 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 SEMA6AQ9H2E6 1030 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 POLR1BQ9H9Y6 1135 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 FBXO34Q9NWN3 711 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 DLL3Q9NYJ7 618 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 ABCG2Q9UNQ0 655 aa18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 PTRH2Q9Y3E5 179 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-205ENST00000397761 IGHV3-20A0A0C4DH32 117 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 FRG2CA6NGY1 282 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 SYT5O00445 386 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 TERTO14746 1132 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 TNFSF15O95150 251 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 EPPINO95925 133 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 ALPPP05187 535 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 THBS1P07996 1170 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 PRKAR1BP31321 381 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 KCNC4Q03721 635 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 RSPO4Q2I0M5 234 aaPredicted RBP18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 DHRS4L2Q6PKH6 230 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 OR4N2Q8NGD1 307 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 ZNF354BQ96LW1 612 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 ZNF223Q9UK11 482 aaPredicted RBP18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 MKLN1Q9UL63 735 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 CBLCQ9ULV8 474 aa18.03■□□□□ 0.48
PDLIM2-205ENST00000397761 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 NPIPB9F8W1W9 429 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 TO15178 435 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 LGI1O95970 557 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 CST1P01037 141 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 IGKV1D-16P01601 117 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 IGHEP01854 428 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 FOLR3P41439 243 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 PSPHP78330 225 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 IGF2-ASQ6U949 168 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 COMTD1Q86VU5 262 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 GALNT15Q8N3T1 639 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 CATSPER1Q8NEC5 780 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 OR8K3Q8NH51 312 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 SPPL2AQ8TCT8 520 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 PROX1Q92786 737 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 VMP1Q96GC9 406 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 LCORQ96JN0 433 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 G6PC3Q9BUM1 346 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 WWTR1Q9GZV5 400 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 QRSL1Q9H0R6 528 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 NXF5Q9H1B4 397 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 VCX3BQ9H321 246 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 NDUFAF4Q9P032 175 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 KCNE5Q9UJ90 142 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 CNOT11Q9UKZ1 510 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 IFT52Q9Y366 437 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 CHST2Q9Y4C5 530 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 PCDHGA10Q9Y5H3 936 aa18.02■□□□□ 0.48
PDLIM2-205ENST00000397761 C2orf92A0A1B0GVN3 265 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 SDHBP21912 280 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 MMP11P24347 488 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 STAT5AP42229 794 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 SLC26A5P58743 744 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 PCOLCEQ15113 449 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF311Q5JNZ3 666 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 FAM69BQ5VUD6 431 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 OR2T5Q6IEZ7 315 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 FIGNL1Q6PIW4 674 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 TMPRSS7Q7RTY8 843 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 ZAR1Q86SH2 424 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 EPHX4Q8IUS5 362 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 PEX5LQ8IYB4 626 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 BCORP1Q8N888 145 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 OR2T29Q8NH02 315 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 OR52P1PQ8NH57 321 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF300Q96RE9 604 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 KLHL4Q9C0H6 718 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF700Q9H0M5 742 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 TRIM45Q9H8W5 580 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 CDV3Q9UKY7 258 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 TCFL5Q9UL49 500 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 SH3GLB1Q9Y371 365 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 HS3ST3B1Q9Y662 390 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 NCOR2Q9Y618 2525 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 HEATR5AQ86XA9 2040 aa18.01■□□□□ 0.47
PDLIM2-205ENST00000397761 WDFY3Q8IZQ1 3526 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms