RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 C1orf226A1L170 272 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 ELOA3DA6NLF2 546 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 SUPT3HB4E1H0 165 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 H0YC42 278 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 SUPT3HO75486 399 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 PIAS1O75925 651 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 CT45A8P0DMV1 189 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 CT45A9P0DMV2 189 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 MTHFD2P13995 350 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 CSNK2A2P19784 350 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 TCEA1P23193 301 aaKnown RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 COMPP49747 757 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 NEK2P51955 445 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 PNLIPRP2P54317 469 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 TPD52P55327 224 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 GPX6P59796 221 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 RPS3AP61247 264 aaKnown RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 LSM11P83369 360 aaKnown RBP eCLIP8.42□□□□□ -1.063e-7■■□□□ 13
NEDD9-203ENST00000397378 DLG1Q12959 904 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 PDIA2Q13087 525 aaKnown RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 GANABQ14697 944 aaKnown RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 FASTKD3Q14CZ7 662 aaKnown RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 CPSF6Q16630 551 aaKnown RBP eCLIP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 ELOA3BQ3SY89 546 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 TRMT12Q53H54 448 aaKnown RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 CT45A2Q5DJT8 189 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 SLC48A1Q6P1K1 146 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 DNAJC14Q6Y2X3 702 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 METTL25Q8N6Q8 603 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 ELOA3Q8NG57 546 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 OR4K17Q8NGC6 315 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 OR52R1Q8NGF1 315 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 LILRB1Q8NHL6 650 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 TRPC4APQ8TEL6 797 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 NEUROG1Q92886 237 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 GFM2Q969S9 779 aaKnown RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 ADOQ96SZ5 270 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 RBBP8Q99708 897 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 CPNE1Q99829 537 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 STMN4Q9H169 189 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 SAYSD1Q9NPB0 183 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 TXNDC16Q9P2K2 825 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 GPR52Q9Y2T5 361 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 EMC9Q9Y3B6 208 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF337Q9Y3M9 751 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 ANGPTL3Q9Y5C1 460 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 PCDHA9Q9Y5H5 950 aa8.42□□□□□ -1.06
NEDD9-203ENST00000397378 HEATR1Q9H583 2144 aaKnown RBP8.42□□□□□ -1.06
NEDD9-203ENST00000397378 CCDC189A1A4V9 331 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 OR2M5A3KFT3 312 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 SYCE1LA8MT33 242 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 CXorf49A8MYA2 514 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 TP73O15350 636 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 SEC14L5O43304 696 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 GUCY1B2O75343 617 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 BCAS2O75934 225 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 AQP8O94778 261 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 KLK1P06870 262 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 HK1P19367 917 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 PSMB1P20618 241 aaKnown RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 USF1P22415 310 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 SRP14P37108 136 aaKnown RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 FEN1P39748 380 aaKnown RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 GP5P40197 560 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 CLDN20P56880 219 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 MRPS22P82650 360 aaKnown RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 GLYR1Q49A26 553 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 CCNYL2Q5T2Q4 361 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 RAET1LQ5VY80 246 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 BEND4Q6ZU67 534 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 CYS1Q717R9 158 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 LARP4Q71RC2 724 aaKnown RBP eCLIP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 PAGE2Q7Z2X7 111 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF525Q8N782 197 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 BANPQ8N9N5 519 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 OR2M3Q8NG83 312 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF675Q8TD23 568 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 CDKL2Q92772 493 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 ERP27Q96DN0 273 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 GMPPAQ96IJ6 420 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 ADAD1Q96M93 576 aaKnown RBP8.41□□□□□ -1.06
NEDD9-203ENST00000397378 OSBPL9Q96SU4 736 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 ACTR6Q9GZN1 396 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 DSN1Q9H410 356 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 OCEL1Q9H607 264 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 IPPKQ9H8X2 491 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 AHSPQ9NZD4 102 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 PPP4R1LQ9P1A2 415 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 PSME2Q9UL46 239 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 ACOT9Q9Y305 439 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 RNF11Q9Y3C5 154 aa8.41□□□□□ -1.06
NEDD9-203ENST00000397378 TRRAPQ9Y4A5 3859 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 H3BML4 177 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 SS18L1O75177 396 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 ERAL1O75616 437 aaKnown RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 SEC31AO94979 1220 aaKnown RBP8.4□□□□□ -1.06
NEDD9-203ENST00000397378 VENTXO95231 258 aa8.4□□□□□ -1.06
NEDD9-203ENST00000397378 CD3EP07766 207 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms