RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TMEM115Q12893 351 aaPredicted RBP11.73□□□□□ -0.53
SMU1-201ENST00000397149 BRAT1Q6PJG6 821 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 DCUN1D3Q8IWE4 304 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 TBC1D20Q96BZ9 403 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 GPN2Q9H9Y4 310 aaPredicted RBP11.73□□□□□ -0.53
SMU1-201ENST00000397149 MGAT3Q09327 533 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 NT5DC1Q5TFE4 455 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
SMU1-201ENST00000397149 KRTCAP2Q8N6L1 136 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 CSNK1A1LQ8N752 337 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 FNDC9Q8TBE3 224 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 HAS1Q92839 578 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 SNAPC3Q92966 411 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 ZNF566Q969W8 418 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 SLC25A18Q9H1K4 315 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 PREBQ9HCU5 417 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 KCTD3Q9Y597 815 aa11.73□□□□□ -0.53
SMU1-201ENST00000397149 HNF1AP20823 631 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 PKLRP30613 574 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 SNCAP37840 140 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 TAF9Q16594 264 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 TMEM53Q6P2H8 277 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 NLRC3Q7RTR2 1065 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 NSUN3Q9H649 340 aaKnown RBP11.72□□□□□ -0.53
SMU1-201ENST00000397149 MTCH1Q9NZJ7 389 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ATRNL1Q5VV63 1379 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 AQP12BA6NM10 295 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 POM121CA8CG34 1229 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 OR7A17O14581 309 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 LATO43561 262 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 STSP08842 583 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ZNF763Q0D2J5 394 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 P2RY14Q15391 338 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 TRAM1Q15629 374 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 DUSP28Q4G0W2 176 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 DPY19L2P1Q6NXN4 242 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CCDC71Q8IV32 467 aaPredicted RBP11.72□□□□□ -0.53
SMU1-201ENST00000397149 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMU1-201ENST00000397149 DEDD2Q8WXF8 326 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 COQ10AQ96MF6 247 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 NEO1Q92859 1461 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 TOR1AO14656 332 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 PAHP00439 452 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 GAB1Q13480 694 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ATP6AP1Q15904 470 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 AQP12AQ8IXF9 295 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 STEAP2Q8NFT2 490 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 OR8U1Q8NH10 309 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 FUNDC2Q9BWH2 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ARNT2Q9HBZ2 717 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 LRP5LA4QPB2 252 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 DHRS4L1P0CG22 281 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 DDCP20711 480 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 RORAP35398 523 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ACTA2P62736 377 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ACTG2P63267 376 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 DEFA6Q01524 100 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 OR8B8Q15620 311 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
SMU1-201ENST00000397149 IRF2BP2Q7Z5L9 587 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 OR5L2Q8NGL0 311 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ZNF461Q8TAF7 563 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ASB9Q96DX5 294 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 IL17FQ96PD4 163 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
SMU1-201ENST00000397149 GPR88Q9GZN0 384 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 REEP4Q9H6H4 257 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 AK6Q9Y3D8 172 aaKnown RBP11.72□□□□□ -0.53
SMU1-201ENST00000397149 FBXO7Q9Y3I1 522 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 LAMC1P11047 1609 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 HECW2Q9P2P5 1572 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 EFCAB7A8K855 629 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 HLA-DOBP13765 273 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 GDF1P27539 372 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CD1CP29017 333 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 SHMT2P34897 504 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 UBE2KP61086 200 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ACTC1P68032 377 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ACTA1P68133 377 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 GBX1Q14549 363 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ZNF791Q3KP31 576 aaPredicted RBP11.72□□□□□ -0.53
SMU1-201ENST00000397149 HNRNPABQ99729 332 aaKnown RBP11.72□□□□□ -0.53
SMU1-201ENST00000397149 SLC6A17Q9H1V8 727 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 QPCTLQ9NXS2 382 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CT45A6P0DMU7 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CT45A5P0DMU8 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CT45A7P0DMV0 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CT45A8P0DMV1 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CT45A9P0DMV2 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 BMXP51813 675 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 PTTG1IPP53801 180 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 PRMT2P55345 433 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CT45A2Q5DJT8 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 CT45A1Q5HYN5 189 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 ZNF852Q6ZMS4 543 aa11.72□□□□□ -0.53
SMU1-201ENST00000397149 MEX3DQ86XN8 651 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms