RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DRD5P21918 477 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 MAGEA2P43356 314 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 ATP6AP1Q15904 470 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 ZNF311Q5JNZ3 666 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 TMPRSS7Q7RTY8 843 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 PEX5LQ8IYB4 626 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 OR52P1PQ8NH57 321 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 GEMIN6Q8WXD5 167 aaKnown RBP18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 ZG16BQ96DA0 208 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 VMP1Q96GC9 406 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 SEMA4CQ9C0C4 833 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 WWTR1Q9GZV5 400 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 SAP130Q9H0E3 1048 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 DLL3Q9NYJ7 618 aa18.91■□□□□ 0.62
VCPKMT-202ENST00000395860 FAM186AA6NE01 2351 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 FRG2CA6NGY1 282 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 CASQ2O14958 399 aaPredicted RBP18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 CLOCKO15516 846 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 PRKNO60260 465 aaPredicted RBP18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 GCKP35557 465 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 PIGAP37287 484 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 OR1E2P47887 323 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 SLC26A5P58743 744 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 RPS18P62269 152 aaKnown RBP18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 VLDLRP98155 873 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 LPCAT4Q643R3 524 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 APCDD1LQ8NCL9 501 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 GPR32P1Q8NGA4 272 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 CENPNQ96H22 339 aaPredicted RBP18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 ZNF354BQ96LW1 612 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 G6PC3Q9BUM1 346 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 BDH2Q9BUT1 245 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 PINK1Q9BXM7 581 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 NXF5Q9H1B4 397 aaKnown RBP18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 IFT52Q9Y366 437 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 NINQ8N4C6 2090 aa18.9■□□□□ 0.62
VCPKMT-202ENST00000395860 GNGT2O14610 69 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 KIAA0513O60268 411 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 MMP11P24347 488 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 PEX2P28328 305 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 DLSTP36957 453 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 STAT5AP42229 794 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 DNASE1L3Q13609 305 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 LRRC36Q1X8D7 754 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 HSDL2Q6YN16 418 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 PACS2Q86VP3 889 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 VRK2Q86Y07 508 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 BCORP1Q8N888 145 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 ZSCAN1Q8NBB4 408 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 ICA1LQ8NDH6 482 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 PMM1Q92871 262 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 VPS50Q96JG6 964 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 RSPO3Q9BXY4 272 aaPredicted RBP18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 DNAJB9Q9UBS3 223 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 ABCG2Q9UNQ0 655 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 HS3ST3B1Q9Y662 390 aa18.89■□□□□ 0.61
VCPKMT-202ENST00000395860 IGHV1-45A0A0A0MS14 117 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 IGKV1D-16P01601 117 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 GUSBP08236 651 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 IL7RP16871 459 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 CD82P27701 267 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 VHLP40337 213 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 RNF4P78317 190 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 PCOLCEQ15113 449 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 DECR1Q16698 335 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 FLYWCH1Q4VC44 716 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 PIWIL3Q7Z3Z3 882 aaKnown RBP18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 AMER2Q8N7J2 671 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 C7orf34Q96L11 122 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 GPR87Q9BY21 358 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 NRSN2Q9GZP1 204 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF223Q9UK11 482 aaPredicted RBP18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF232Q9UNY5 417 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 NPIPA5A0A0B4J1W7 369 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 AGAP5A6NIR3 686 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 C21orf140B9A014 251 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 NPIPA7E9PJI5 369 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 NPIPA8P0DM63 369 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 NR0B1P51843 470 aaKnown RBP18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 KCNC4Q03721 635 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 SSPNQ14714 243 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 LARS2Q15031 903 aaKnown RBP18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 RSPO4Q2I0M5 234 aaPredicted RBP18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 ZAR1Q86SH2 424 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF700Q9H0M5 742 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 VCX3BQ9H321 246 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 MRTO4Q9UKD2 239 aaKnown RBP18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 SLC13A4Q9UKG4 626 aa18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 ZNF443Q9Y2A4 671 aaPredicted RBP18.88■□□□□ 0.61
VCPKMT-202ENST00000395860 TRBV11-1A0A0K0K1C0 115 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 CDC14CA4D256 554 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 CDRT15L2A8MXV6 281 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 IFNW1P05000 195 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 DBIP07108 87 aaKnown RBP18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 COX6A1P12074 109 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 ITGA2P17301 1181 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 PRKAR1BP31321 381 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 OTX2P32243 289 aa18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 PUM1Q14671 1186 aaKnown RBP eCLIP18.87■□□□□ 0.61
VCPKMT-202ENST00000395860 GRAMD1BQ3KR37 738 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms