RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 TGM6O95932 706 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 UROSP10746 265 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 CD1EP15812 388 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 PRPH2P23942 346 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 NTSP30990 170 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 RIPPLY3P57055 190 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 NAA20P61599 178 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 PSPHP78330 225 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 SLC18A2Q05940 514 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 DAZAP2Q15038 168 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 CFAP157Q5JU67 520 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 Q6ZSR9 355 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 ZNF551Q7Z340 670 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 C10orf107Q8IVU9 208 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 EIF1ADQ8N9N8 165 aaKnown RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 OR4K17Q8NGC6 315 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 WNT2BQ93097 391 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 GFM2Q969S9 779 aaKnown RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 INTS12Q96CB8 462 aaKnown RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 LRRC46Q96FV0 321 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 LMF2Q9BU23 707 aaKnown RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 SFXN3Q9BWM7 321 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 GATA5Q9BWX5 397 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 CXXC4Q9H2H0 198 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 DSN1Q9H410 356 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 TUBB1Q9H4B7 451 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 RRAGDQ9NQL2 400 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 DDX18Q9NVP1 670 aaKnown RBP16.32■□□□□ 0.2
CXCL12-204ENST00000395793 PLEKHA6Q9Y2H5 1048 aa16.32■□□□□ 0.2
CXCL12-204ENST00000395793 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 TUBAL3A6NHL2 446 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 NPIPB8E9PQR5 432 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 COPEO14579 308 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 SEC22BO75396 215 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 SLITRK5O94991 958 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 IGKV1D-16P01601 117 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 KRT4P19013 534 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 CHMP24386 653 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 CCT5P48643 541 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 CLDN15P56746 228 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 SORDQ00796 357 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 STX5Q13190 355 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 CYP27C1Q4G0S4 372 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 LIPMQ5VYY2 423 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 AAGABQ6PD74 315 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 IKBIPQ70UQ0 350 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 LUZP2Q86TE4 346 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 CNPY4Q8N129 248 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 NINJ1Q92982 152 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 CIDECQ96AQ7 238 aaPredicted RBP16.31■□□□□ 0.2
CXCL12-204ENST00000395793 TM9SF2Q99805 663 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 GALNT8Q9NY28 637 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 MED11Q9P086 117 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 PPP4R1LQ9P1A2 415 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 WBP11Q9Y2W2 641 aaKnown RBP16.31■□□□□ 0.2
CXCL12-204ENST00000395793 FIS1Q9Y3D6 152 aa16.31■□□□□ 0.2
CXCL12-204ENST00000395793 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 H0YC42 278 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 TNFSF13O75888 250 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 IL33O95760 270 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 EPXP11678 715 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 TPD52P55327 224 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-204ENST00000395793 DSCR4P56555 118 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-204ENST00000395793 MRPS22P82650 360 aaKnown RBP16.3■□□□□ 0.2
CXCL12-204ENST00000395793 HSPB3Q12988 150 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 MARCH3Q86UD3 253 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 KIF18BQ86Y91 864 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 OR5M1Q8NGP8 315 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 OR2W6PQ8NHA6 318 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 RMND5BQ96G75 393 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-204ENST00000395793 ZFP3Q96NJ6 502 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 FOXC2Q99958 501 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 RBM24Q9BX46 236 aaKnown RBP16.3■□□□□ 0.2
CXCL12-204ENST00000395793 LRTM1Q9HBL6 345 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 ABCG2Q9UNQ0 655 aa16.3■□□□□ 0.2
CXCL12-204ENST00000395793 A0A1W2PPR1 153 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 TMEM233B4DJY2 109 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 AZIN1O14977 448 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 SDC1P18827 310 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 HK1P19367 917 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 MAP3K8P41279 467 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 RFX3P48380 749 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 SUCLG1P53597 346 aaKnown RBP16.29■□□□□ 0.2
CXCL12-204ENST00000395793 DECR1Q16698 335 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 APOOLQ6UXV4 268 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 GRAMD2AQ8IUY3 354 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 UBQLNLQ8IYU4 475 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 CLHC1Q8NHS4 586 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 PIK3R3Q92569 461 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 HOXB13Q92826 284 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-204ENST00000395793 METTL2AQ96IZ6 378 aaKnown RBP16.29■□□□□ 0.2
CXCL12-204ENST00000395793 L2HGDHQ9H9P8 463 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 PPCSQ9HAB8 311 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 Q9N2J8 555 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 EQTNQ9NQ60 294 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 C1orf109Q9NX04 203 aa16.29■□□□□ 0.2
CXCL12-204ENST00000395793 FAM120CQ9NX05 1096 aaKnown RBP16.29■□□□□ 0.2
CXCL12-204ENST00000395793 ZNF469Q96JG9 3925 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-204ENST00000395793 ACANP16112 2415 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms