RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 OMPP47874 163 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 INSL4Q14641 139 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 TMEM52BQ4KMG9 183 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 FNDC3BQ53EP0 1204 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 METAP1DQ6UB28 335 aaPredicted RBP17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 TMEM64Q6YI46 380 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 ERN2Q76MJ5 926 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 ADCK2Q7Z695 626 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 LIX1LQ8IVB5 337 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 KLK6Q92876 244 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 ARHGDIGQ99819 225 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 ZNF649Q9BS31 505 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 PITHD1Q9GZP4 211 aaPredicted RBP17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 TBC1D17Q9HA65 648 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 KLHL21Q9UJP4 597 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 CLCA3PQ9Y6N3 262 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 IGKV1-8A0A0C4DH67 115 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 LRIT2A6NDA9 550 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 CPSF4LA6NMK7 179 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 C4orf51C9J302 202 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 GABRPO00591 440 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 PGRMC2O15173 223 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 PROM1O43490 865 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 CLEC3AO75596 197 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 RPN2P04844 631 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 ACP5P13686 325 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 AVPR1BP47901 424 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 CHRNEQ04844 493 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 IL18Q14116 193 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 TRAM2Q15035 370 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 AADACL4Q5VUY2 407 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 METRNLQ641Q3 311 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 SLC30A6Q6NXT4 461 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 MZT2BQ6NZ67 158 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 VITQ6UXI7 678 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 ZFAND1Q8TCF1 268 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 TMEM43Q9BTV4 400 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 S1PR5Q9H228 398 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 RPRD1BQ9NQG5 326 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 GDE1Q9NZC3 331 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 SNRNP200O75643 2136 aaKnown RBP17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 A0A1W2PS29 197 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 SLC9A3R1O14745 358 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 LYRM1O43325 122 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 GNSP15586 552 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 CELP19835 753 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 LTBRP36941 435 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 IFNGR2P38484 337 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 FAPQ12884 760 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 GAB4Q2WGN9 574 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 ZNF791Q3KP31 576 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 ZNF311Q5JNZ3 666 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 VASNQ6EMK4 673 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 LRRTM4Q86VH4 590 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 VRK2Q86Y07 508 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 SFTPA1Q8IWL2 248 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 GRPEL2Q8TAA5 225 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 SFXN5Q8TD22 340 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 JPH3Q8WXH2 748 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 DIO2Q92813 273 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 UPRTQ96BW1 309 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 ZG16BQ96DA0 208 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 CNRIP1Q96F85 164 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 CAMK1GQ96NX5 476 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 MACROD1Q9BQ69 325 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 FAIM2Q9BWQ8 316 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 LGR4Q9BXB1 951 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 PLA2G2FQ9BZM2 168 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 RNF32Q9H0A6 362 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 POLMQ9NP87 494 aaPredicted RBP17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 CLDND1Q9NY35 253 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 NLKQ9UBE8 527 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 DOCK9Q9BZ29 2069 aa17.18■□□□□ 0.34
PCDHA1-202ENST00000394633 SURF4O15260 269 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 GAAP10253 952 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 PRKAR1AP10644 381 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 ERP29P30040 261 aaKnown RBP17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 TRHRP34981 398 aaPredicted RBP17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 TRIM23P36406 574 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 CLDN20P56880 219 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 GNA13Q14344 377 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 HNRNPA1L2Q32P51 320 aaKnown RBP17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 TIGD3Q6B0B8 471 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 TMEM107Q6UX40 140 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 CCDC116Q8IYX3 515 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 NEIL3Q8TAT5 605 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 SLC38A1Q9H2H9 487 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 CHST2Q9Y4C5 530 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 FAM240BA0A1B0GVZ2 78 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 A0A1W2PR48 441 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 CD8B2A6NJW9 211 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 SYT5O00445 386 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 CPNE3O75131 537 aaKnown RBP17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 TRIM3O75382 744 aaPredicted RBP17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 HLA-DPB1P04440 258 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 CD8BP10966 210 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 PTBP1P26599 531 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 GZMKP49863 264 aa17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 ANXA11P50995 505 aaKnown RBP17.17■□□□□ 0.34
PCDHA1-202ENST00000394633 RIN1Q13671 783 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms