RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 HCFC2Q9Y5Z7 792 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 B4DXG7 233 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 MEN1O00255 615 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 MID1O15344 667 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 HLA-DQA2P01906 255 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ZNF10P21506 573 aaPredicted RBP15.17■□□□□ 0.02
PCDH1-203ENST00000394536 STOMP27105 288 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 RPA4Q13156 261 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ELOAQ14241 798 aaKnown RBP15.17■□□□□ 0.02
PCDH1-203ENST00000394536 LTB4RQ15722 352 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 NDUFAF6Q330K2 333 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SFRP4Q6FHJ7 346 aaPredicted RBP15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ZC3H14Q6PJT7 736 aaKnown RBP15.17■□□□□ 0.02
PCDH1-203ENST00000394536 FANK1Q8TC84 345 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 CREB3L4Q8TEY5 395 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SRRQ9GZT4 340 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 DPEP2Q9H4A9 486 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SLC23A2Q9UGH3 650 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 RASD1Q9Y272 281 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 UBXN7O94888 489 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SEMA3DO95025 777 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SLC2A10O95528 541 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 PAHP00439 452 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 DRD2P14416 443 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 BMP8BP34820 402 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 NNATQ16517 81 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 MPEG1Q2M385 716 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 BMP8AQ7Z5Y6 402 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ADGRD2Q7Z7M1 963 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 AMER3Q8N944 861 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 FBLIM1Q8WUP2 373 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 SLC41A3Q96GZ6 507 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ZSWIM3Q96MP5 696 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 RAD9AQ99638 391 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 DPCDQ9BVM2 203 aaPredicted RBP15.17■□□□□ 0.02
PCDH1-203ENST00000394536 BARHL1Q9BZE3 327 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 MARK1Q9P0L2 795 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 USP36Q9P275 1121 aaKnown RBP15.17■□□□□ 0.02
PCDH1-203ENST00000394536 ATG4BQ9Y4P1 393 aa15.17■□□□□ 0.02
PCDH1-203ENST00000394536 MYO16Q9Y6X6 1858 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ZC3H12DA2A288 527 aaKnown RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 PSMD9O00233 223 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 EFCAB14O75071 495 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 MT-ND5P03915 603 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ACADLP28330 430 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 IRS1P35568 1242 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ERVFC1P60507 584 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 FABP5Q01469 135 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 SAXO2Q658L1 398 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 TMEM215Q68D42 235 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 PLPP6Q8IY26 295 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 AMDHD1Q96NU7 426 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ALG8Q9BVK2 526 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 PLA2G12AQ9BZM1 189 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 H3BQ06 376 aaPredicted RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 LCMT2O60294 686 aaKnown RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 F8A1P23610 371 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 RAB28P51157 221 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 CRYBA2P53672 197 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ZNF267Q14586 743 aaPredicted RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 TMEM44Q2T9K0 475 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ENPP7Q6UWV6 458 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 KIAA1324Q6UXG2 1013 aaKnown RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 RNF165Q6ZSG1 346 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 NKAIN4Q8IVV8 208 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 OR5H6Q8NGV6 325 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 TBC1D24Q9ULP9 559 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 MGAT4AQ9UM21 535 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 A0A0G2JPF8 293 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 A0A1B0GVT2 93 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 PRAMEF25A6NGN4 478 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 HNRNPCL3B7ZW38 293 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 AKR7A2O43488 359 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 HNRNPCL4P0DMR1 293 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 PSMA3P25788 255 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 SHC1P29353 583 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 TRIM23P36406 574 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 CRYBB2P43320 205 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ZNHIT3Q15649 155 aaPredicted RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ENTPD8Q5MY95 495 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 LSRQ86X29 649 aaPredicted RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 C1orf216Q8TAB5 229 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 ZNF296Q8WUU4 475 aaPredicted RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 TRMT61AQ96FX7 289 aaKnown RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 GSDMCQ9BYG8 508 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 KLHL31Q9H511 634 aa15.16■□□□□ 0.02
PCDH1-203ENST00000394536 RBFOX1Q9NWB1 397 aaKnown RBP15.16■□□□□ 0.02
PCDH1-203ENST00000394536 H0YC42 278 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 HOXC11O43248 304 aaPredicted RBP15.15■□□□□ 0.02
PCDH1-203ENST00000394536 NTN1O95631 604 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 GRPRP30550 384 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 KIR2DL3P43628 341 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 RTL4Q6ZR62 310 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 LAS2Q8IYD9 372 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 SMAP2Q8WU79 429 aaPredicted RBP15.15■□□□□ 0.02
PCDH1-203ENST00000394536 ZG16BQ96DA0 208 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 THAP7Q9BT49 309 aaPredicted RBP15.15■□□□□ 0.02
PCDH1-203ENST00000394536 SLITRK2Q9H156 845 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 NDUFB11Q9NX14 153 aa15.15■□□□□ 0.02
PCDH1-203ENST00000394536 GNG8Q9UK08 70 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms