RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CPEB1Q9BZB8 566 aaKnown RBP17.74■□□□□ 0.43
HOXC6-202ENST00000394331 NKX6-2Q9C056 277 aaPredicted RBP17.74■□□□□ 0.43
HOXC6-202ENST00000394331 EVA1AQ9H8M9 152 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 DNAJC11Q9NVH1 559 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 HS3ST2Q9Y278 367 aa17.74■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF106Q9H2Y7 1883 aaKnown RBP17.73■□□□□ 0.43
HOXC6-202ENST00000394331 A0A1B0GW55 424 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 SHISA3A0PJX4 238 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 LINC00587B1AMM8 73 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF593O00488 134 aaPredicted RBP17.73■□□□□ 0.43
HOXC6-202ENST00000394331 GABRPO00591 440 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 YY2O15391 372 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 EEF1E1O43324 174 aaKnown RBP17.73■□□□□ 0.43
HOXC6-202ENST00000394331 NCR1O76036 304 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 RGS11O94810 467 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 DUX4L2P0CJ85 424 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 DUX4L3P0CJ86 424 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 DUX4L4P0CJ87 422 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 DUX4L5P0CJ88 424 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 DUX4L6P0CJ89 424 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 DUX4L7P0CJ90 424 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 ACP2P11117 423 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 FEN1P39748 380 aaKnown RBP17.73■□□□□ 0.43
HOXC6-202ENST00000394331 MTNR1BP49286 362 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 MVDP53602 400 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 SEC23BQ15437 767 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 PLEKHS1Q5SXH7 462 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 GCNT6Q5T4J0 391 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 C22orf39Q6P5X5 142 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 CORO6Q6QEF8 472 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 WDR53Q7Z5U6 358 aaPredicted RBP17.73■□□□□ 0.43
HOXC6-202ENST00000394331 PAQR7Q86WK9 346 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 CCDC36Q8IYA8 594 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF454Q8N9F8 522 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 ASB12Q8WXK4 309 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 ELMOD3Q96FG2 381 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 LRRC46Q96FV0 321 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 DUX4Q9UBX2 424 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 CYB5R1Q9UHQ9 305 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 GPR160Q9UJ42 338 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 BNIP3LO60238 219 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 GIPP09681 153 aaPredicted RBP17.73■□□□□ 0.43
HOXC6-202ENST00000394331 GIFP27352 417 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 GAB1Q13480 694 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 SCARB2Q14108 478 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 OR2G6Q5TZ20 316 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 GAREM2Q75VX8 874 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 SLITRK4Q8IW52 837 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 AUTS2Q8WXX7 1259 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 VOPP1Q96AW1 172 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF582Q96NG8 517 aaPredicted RBP17.73■□□□□ 0.43
HOXC6-202ENST00000394331 ABCG8Q9H221 673 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 SEMA3GQ9NS98 782 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 SPG21Q9NZD8 308 aa17.73■□□□□ 0.43
HOXC6-202ENST00000394331 GATCO43716 136 aaKnown RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 RP2O75695 350 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 SOX30O94993 753 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 POP4O95707 220 aaKnown RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 CHRM5P08912 532 aaPredicted RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 NFYAP23511 347 aaPredicted RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 CTSOP43234 321 aaPredicted RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 SPINT3P49223 89 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 MICBQ29980 383 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 SLC22A10Q63ZE4 541 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 FRG2Q64ET8 278 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 NPAS3Q8IXF0 933 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 ZNF687Q8N1G0 1237 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 TOMM5Q8N4H5 51 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 FAM71CQ8NEG0 241 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 GATAD2BQ8WXI9 593 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 FRG2BQ96QU4 278 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 NPDC1Q9NQX5 325 aaPredicted RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 PLCL2Q9UPR0 1127 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 TMEM5Q9Y2B1 443 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 MCRIP1C9JLW8 97 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 GFYI3L273 518 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 SCAMP2O15127 329 aaKnown RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 SDC3O75056 442 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 IFNW1P05000 195 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 LAMP1P11279 417 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 ATP1B2P14415 290 aaPredicted RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 EFNB1P98172 346 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 EEF1A2Q05639 463 aaKnown RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 ZXDCQ2QGD7 858 aaPredicted RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 GPR135Q8IZ08 494 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 COQ8AQ8NI60 647 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 SPRTNQ9H040 489 aaPredicted RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 BRD9Q9H8M2 597 aa17.72■□□□□ 0.43
HOXC6-202ENST00000394331 GPN3Q9UHW5 284 aaPredicted RBP17.72■□□□□ 0.43
HOXC6-202ENST00000394331 FAAHO00519 579 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 GNB5O14775 395 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 PEX14O75381 377 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 RASGRP1O95267 797 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 HLXQ14774 488 aaPredicted RBP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 RFLNAQ6ZTI6 216 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 IKBIPQ70UQ0 350 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 OR1M1Q8NGA1 313 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.71■□□□□ 0.43
HOXC6-202ENST00000394331 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
HOXC6-202ENST00000394331 SLC22A14Q9Y267 594 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms