RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 PIGUQ9H490 435 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SP140LQ9H930 580 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 POLMQ9NP87 494 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 EXOSC4Q9NPD3 245 aaKnown RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 ISYNA1Q9NPH2 558 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 POLE3Q9NRF9 147 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 DUSP22Q9NRW4 184 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 C14orf105Q9NVL8 296 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 MRPS18AQ9NVS2 196 aaKnown RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 TAS2R16Q9NYV7 291 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 NLGN3Q9NZ94 848 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 KCMF1Q9P0J7 381 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 PILRAQ9UKJ1 303 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SLC6A14Q9UN76 642 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 SSR3Q9UNL2 185 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 C19orf53Q9UNZ5 99 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-202ENST00000394092 UGT2A1Q9Y4X1 527 aa6.73□□□□□ -1.33
SMAD1-202ENST00000394092 C5orf42Q9H799 3197 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 A0A1W2PS29 197 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 TMEM129A0AVI4 362 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 WASHC1A8K0Z3 465 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 LOC110117498-PIK3R3F6TDL0 507 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 P2RX6O15547 441 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CHST10O43529 356 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 PRKYO43930 277 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 PLOD3O60568 738 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 FMO6PO60774 539 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CTSVO60911 334 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 COQ9O75208 318 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 STX11O75558 287 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 HMGN1P05114 100 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 GRK5P34947 590 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 PTGER1P34995 402 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 TGFBR1P36897 503 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CD97P48960 835 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 BLKP51451 505 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 DGKEP52429 567 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 PDX1P52945 283 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 WNT4P56705 351 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 DEFA1P59665 94 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 DEFA3P59666 94 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 UBE2IP63279 158 aaKnown RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 SIM1P81133 766 aaPredicted RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 RUNX1T1Q06455 604 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 RUNX2Q13950 521 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 SSX1Q16384 188 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 PUS10Q3MIT2 529 aaKnown RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 ZNF628Q5EBL2 1059 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 TYW3Q6IPR3 259 aaKnown RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 RPL13AP3Q6NVV1 102 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 Q6ZSR6 202 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 BTLAQ7Z6A9 289 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 ATCAYQ86WG3 371 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 IQCF1Q8N6M8 205 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 GALNT6Q8NCL4 622 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 FLCNQ8NFG4 579 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 OR52I1Q8NGK6 324 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CCL4L1Q8NHW4 92 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 PIK3R3Q92569 461 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 ITPKCQ96DU7 683 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 SLC41A3Q96GZ6 507 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 SLC6A18Q96N87 628 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 FCRL4Q96PJ5 515 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CCDC3Q9BQI4 270 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CDADC1Q9BWV3 514 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 ALOXE3Q9BYJ1 711 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 ZNF350Q9GZX5 532 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 SAP130Q9H0E3 1048 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 QRSL1Q9H0R6 528 aaKnown RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 SYNPO2LQ9H987 977 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CPNE5Q9HCH3 593 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 HHATLQ9HCP6 504 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 FGF20Q9NP95 211 aaPredicted RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CTPS2Q9NRF8 586 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 SEMA4GQ9NTN9 838 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 USP36Q9P275 1121 aaKnown RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CPNE7Q9UBL6 633 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 TESQ9UGI8 421 aaKnown RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CD207Q9UJ71 328 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 ZNF229Q9UJW7 825 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 CA5BQ9Y2D0 317 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 KCNE3Q9Y6H6 103 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 SCN2AQ99250 2005 aa6.72□□□□□ -1.33
SMAD1-202ENST00000394092 MN1Q10571 1320 aaPredicted RBP6.72□□□□□ -1.33
SMAD1-202ENST00000394092 TRBV23OR9-2A0A075B6M9 112 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 HYKKA2RU49 373 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 BLACEA4D250 179 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 KDM4EB2RXH2 506 aaPredicted RBP6.71□□□□□ -1.33
SMAD1-202ENST00000394092 ZNF670-ZNF695F2Z2N8 137 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 H0YGG7 62 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 STK25O00506 426 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 DSCR3O14972 297 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 SNX4O95219 450 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 PTTG1O95997 202 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 IGLV3-19P01714 112 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 IGFBP1P08833 259 aaPredicted RBP6.71□□□□□ -1.33
SMAD1-202ENST00000394092 TSPAN19P0C672 248 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 CTSEP14091 401 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 CPEP16870 476 aa6.71□□□□□ -1.33
SMAD1-202ENST00000394092 GABRG2P18507 467 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms