RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 OR2L8Q8NGY9 312 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 ACOT11Q8WXI4 607 aaPredicted RBP17.64■□□□□ 0.42
CBX1-202ENST00000393408 SUSD6Q92537 303 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 MRPS30Q9NP92 439 aaKnown RBP17.64■□□□□ 0.42
CBX1-202ENST00000393408 B3GAT2Q9NPZ5 323 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 PRSS16Q9NQE7 514 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 IMP3Q9NV31 184 aaKnown RBP17.64■□□□□ 0.42
CBX1-202ENST00000393408 IL20Q9NYY1 176 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 MALT1Q9UDY8 824 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 NTNG1Q9Y2I2 539 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 OR1A2Q9Y585 309 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 PCDHGB7Q9Y5F8 929 aa17.64■□□□□ 0.42
CBX1-202ENST00000393408 GABRPO00591 440 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 KLF4O43474 513 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 AKAP8O43823 692 aaKnown RBP17.64■□□□□ 0.41
CBX1-202ENST00000393408 NCR1O76036 304 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 NFATC1O95644 943 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 IGHA1P01876 353 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 HLA-DPB1P04440 258 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 CERS1P27544 350 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 CTNNB1P35222 781 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 AVPR1BP47901 424 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 DECR1Q16698 335 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 ZNF791Q3KP31 576 aaPredicted RBP17.64■□□□□ 0.41
CBX1-202ENST00000393408 PLET1Q6UQ28 207 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 VASH1Q7L8A9 365 aaPredicted RBP17.64■□□□□ 0.41
CBX1-202ENST00000393408 KLHL36Q8N4N3 616 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 C19orf18Q8NEA5 215 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 OR2L5Q8NG80 312 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 SPPL3Q8TCT6 385 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 ELP4Q96EB1 424 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 SENP5Q96HI0 755 aaPredicted RBP17.64■□□□□ 0.41
CBX1-202ENST00000393408 C11orf49Q9H6J7 331 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 SLA2Q9H6Q3 261 aa17.64■□□□□ 0.41
CBX1-202ENST00000393408 RBFOX1Q9NWB1 397 aaKnown RBP17.64■□□□□ 0.41
CBX1-202ENST00000393408 AGRPO00253 132 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 RFXAPO00287 272 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 LATO43561 262 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 ZIC2O95409 532 aaPredicted RBP17.63■□□□□ 0.41
CBX1-202ENST00000393408 CELP19835 753 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 PTBP1P26599 531 aaKnown RBP eCLIP17.63■□□□□ 0.41
CBX1-202ENST00000393408 PGGHGQ32M88 737 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 YIF1BQ5BJH7 314 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 Q5BKY6 102 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 VASNQ6EMK4 673 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 ABI3BPQ7Z7G0 1075 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 BBS1Q8NFJ9 593 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 NLGN4YQ8NFZ3 816 aaPredicted RBP17.63■□□□□ 0.41
CBX1-202ENST00000393408 OR9A2Q8NGT5 310 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 OR52N1Q8NH53 320 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 NEIL3Q8TAT5 605 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 CHFRQ96EP1 664 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 CRISPLD2Q9H0B8 497 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 MED17Q9NVC6 651 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 CALML5Q9NZT1 146 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 INSL6Q9Y581 213 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 MDC1Q14676 2089 aaKnown RBP17.63■□□□□ 0.41
CBX1-202ENST00000393408 CHST10O43529 356 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 THY1P04216 161 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 FAM157BP0CG42 384 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 PRKAR1BP31321 381 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 IFNA8P32881 189 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 DRD3P35462 400 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 GPR4P46093 362 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 ARFIP1P53367 373 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 RIN1Q13671 783 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 INSL4Q14641 139 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 C6orf132Q5T0Z8 1188 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 GLCCI1Q86VQ1 547 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 DUSP18Q8NEJ0 188 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 SPRYD4Q8WW59 207 aaPredicted RBP17.63■□□□□ 0.41
CBX1-202ENST00000393408 RIPOR3Q96MK2 946 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 ZNF681Q96N22 645 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 RNF32Q9H0A6 362 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 GIMAP4Q9NUV9 329 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 ASB6Q9NWX5 421 aa17.63■□□□□ 0.41
CBX1-202ENST00000393408 GPR89AB7ZAQ6 455 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 PROM1O43490 865 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 PRICKLE3O43900 615 aaPredicted RBP17.62■□□□□ 0.41
CBX1-202ENST00000393408 GPR89BP0CG08 455 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 ALAS2P22557 587 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 HTR1FP30939 366 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 MPIP34949 423 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 AHRP35869 848 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 IL18Q14116 193 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 CEBPEQ15744 281 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 TATDN3Q17R31 274 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 EOGTQ5NDL2 527 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 MZT2BQ6NZ67 158 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 ZNF620Q6ZNG0 422 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 PLEKHM3Q6ZWE6 761 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 NRMQ8IXM6 262 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 TCTE3Q8IZS6 198 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 TMEM145Q8NBT3 493 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 DNAJA4Q8WW22 397 aaPredicted RBP17.62■□□□□ 0.41
CBX1-202ENST00000393408 SMG7Q92540 1137 aaKnown RBP17.62■□□□□ 0.41
CBX1-202ENST00000393408 TMEM43Q9BTV4 400 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 TEX12Q9BXU0 123 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 NDEL1Q9GZM8 345 aa17.62■□□□□ 0.41
CBX1-202ENST00000393408 WDR26Q9H7D7 661 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms