RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 DUSP5Q16690 384 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 OLIG3Q7RTU3 272 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 PPP1R32Q7Z5V6 425 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 KRT73Q86Y46 540 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 PRSS58Q8IYP2 241 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 GALNT4Q8N4A0 578 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 SMYD1Q8NB12 490 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 SLC16A11Q8NCK7 471 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 OR52R1Q8NGF1 315 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 SPPL2AQ8TCT8 520 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 THAP4Q8WY91 577 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 CDS1Q92903 461 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 PTCHD1Q96NR3 888 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 COL21A1Q96P44 957 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 TREX2Q9BQ50 279 aaPredicted RBP12.59□□□□□ -0.39
PTN-202ENST00000393083 CRB3Q9BUF7 120 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 C9orf16Q9BUW7 83 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 IL1RAPQ9NPH3 570 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 GIN1Q9NXP7 522 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 BAG5Q9UL15 447 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 ABCG2Q9UNQ0 655 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 LIPT1Q9Y234 373 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 LRRC42Q9Y546 428 aa12.59□□□□□ -0.39
PTN-202ENST00000393083 SOCS2O14508 198 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 PRSS23O95084 383 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 H6PDO95479 791 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 ALOX5P09917 674 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 ACADSP16219 412 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 TNFRSF1BP20333 461 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 CD247P20963 164 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 OTX2P32243 289 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 DUSP8Q13202 625 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 BIKQ13323 160 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 DEFB109BQ30KR1 87 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 PRAMEF8Q5VWM4 474 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 PRAMEF7Q5VXH5 474 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 ZCCHC12Q6PEW1 402 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 ZBTB49Q6ZSB9 765 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 MRGPREQ86SM8 312 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 RAB43Q86YS6 212 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 ARMC8Q8IUR7 673 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 CDRT4Q8N9R6 151 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 GEMIN6Q8WXD5 167 aaKnown RBP12.58□□□□□ -0.4
PTN-202ENST00000393083 TTC9Q92623 222 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 TSLPQ969D9 159 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 TMBIM1Q969X1 311 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 NACC2Q96BF6 587 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 SLC35A4Q96G79 324 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 MESP1Q9BRJ9 268 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 CNPPD1Q9BV87 410 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 NTN4Q9HB63 628 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 BCL2L10Q9HD36 194 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 CALML5Q9NZT1 146 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 ZNF639Q9UID6 485 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 C3orf18Q9UK00 162 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 CNOT11Q9UKZ1 510 aaKnown RBP12.58□□□□□ -0.4
PTN-202ENST00000393083 POLHQ9Y253 713 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 GPC6Q9Y625 555 aaPredicted RBP12.58□□□□□ -0.4
PTN-202ENST00000393083 HS3ST3B1Q9Y662 390 aa12.58□□□□□ -0.4
PTN-202ENST00000393083 IGKV3D-11A0A0A0MRZ8 115 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 A0A0G2JPF8 293 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 HNRNPCL2B2RXH8 293 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 IDSB3KWA1 339 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 HNRNPCL3B7ZW38 293 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 PDLIM1O00151 329 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 SOCS6O14544 535 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 PRAMEF2O60811 474 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 SERPINB7O75635 380 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 MFN2O95140 757 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 ITGB2P05107 769 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 HNRNPCL4P0DMR1 293 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 ZNF26P17031 533 aaPredicted RBP12.57□□□□□ -0.4
PTN-202ENST00000393083 TNNI3P19429 210 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 SSTR4P31391 388 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 GALNSP34059 522 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 PGDP52209 483 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 EMP2P54851 167 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 RHAGQ02094 409 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 ZNF267Q14586 743 aaPredicted RBP12.57□□□□□ -0.4
PTN-202ENST00000393083 TBR1Q16650 682 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 NRF1Q16656 503 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 EXOSC6Q5RKV6 272 aaKnown RBP12.57□□□□□ -0.4
PTN-202ENST00000393083 WLSQ5T9L3 541 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 HEPHL1Q6MZM0 1159 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 PIWIL3Q7Z3Z3 882 aaKnown RBP12.57□□□□□ -0.4
PTN-202ENST00000393083 CBR4Q8N4T8 237 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 TRNT1Q96Q11 434 aaKnown RBP12.57□□□□□ -0.4
PTN-202ENST00000393083 STACQ99469 402 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 BTBD2Q9BX70 525 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 VN1R1Q9GZP7 353 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 PIGUQ9H490 435 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 FOLH1BQ9HBA9 442 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 SEC14L3Q9UDX4 400 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 MKL2Q9ULH7 1088 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 ERVK-19Q9WJR5 959 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 KCNMB2Q9Y691 235 aa12.57□□□□□ -0.4
PTN-202ENST00000393083 A8MVJ9 347 aa12.56□□□□□ -0.4
PTN-202ENST00000393083 HRKO00198 91 aa12.56□□□□□ -0.4
PTN-202ENST00000393083 ACOX3O15254 700 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms