RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 EXTL2Q9UBQ6 330 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 REV1Q9UBZ9 1251 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 GPR34Q9UPC5 381 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 FRYLO94915 3013 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 CABIN1Q9Y6J0 2220 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 FAM183AA6NL82 134 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 SCO2O43819 266 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 NTN1O95631 604 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 CRYZL1O95825 349 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 LAMP2P13473 410 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 CD79BP40259 229 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 RFX3P48380 749 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 MZT2AQ6P582 158 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 ZNF765Q7L2R6 523 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 OR51G2Q8NGK0 314 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 OR6T1Q8NGN1 323 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 RAB7BQ96AH8 199 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 SECISBP2Q96T21 854 aaKnown RBP10.19□□□□□ -0.78
BRF1-204ENST00000392557 HDAC8Q9BY41 377 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 DPEP2Q9H4A9 486 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 CACYBPQ9HB71 228 aaKnown RBP10.19□□□□□ -0.78
BRF1-204ENST00000392557 SLAMF7Q9NQ25 335 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 DZANK1Q9NVP4 752 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 NKIRAS2Q9NYR9 191 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 PLEKHB1Q9UF11 243 aaPredicted RBP10.19□□□□□ -0.78
BRF1-204ENST00000392557 ZFR2Q9UPR6 939 aaKnown RBP10.19□□□□□ -0.78
BRF1-204ENST00000392557 IQCMA0A1B0GVH7 501 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 PIPP12273 146 aaPredicted RBP10.19□□□□□ -0.78
BRF1-204ENST00000392557 CPN2P22792 545 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 ACADLP28330 430 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 HOXD11P31277 338 aaPredicted RBP10.19□□□□□ -0.78
BRF1-204ENST00000392557 HMGA2P52926 109 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 BNC1Q01954 994 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 MAB21L1Q13394 359 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 E2F2Q14209 437 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 BCL2L15Q5TBC7 163 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 ANKK1Q8NFD2 765 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 UCN3Q969E3 161 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 PDXPQ96GD0 296 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 METTL2AQ96IZ6 378 aaKnown RBP10.19□□□□□ -0.78
BRF1-204ENST00000392557 SLC6A18Q96N87 628 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 TTTY10Q9BZA0 68 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 PLA2G12AQ9BZM1 189 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 SAP130Q9H0E3 1048 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 MED28Q9H204 178 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 SERHL2Q9H4I8 314 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 SLC25A19Q9HC21 320 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 PHPT1Q9NRX4 125 aaPredicted RBP10.19□□□□□ -0.78
BRF1-204ENST00000392557 FBXW2Q9UKT8 454 aa10.19□□□□□ -0.78
BRF1-204ENST00000392557 PLA2G10O15496 165 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 MSL3P1P0C860 447 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 GPR4P46093 362 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 CLDN2P57739 230 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 PPP3R1P63098 170 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 CAMK2BQ13554 666 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 EFR3AQ14156 821 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 FGL2Q14314 439 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 KIAA1324Q6UXG2 1013 aaKnown RBP10.18□□□□□ -0.78
BRF1-204ENST00000392557 HSDL2Q6YN16 418 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 CAMKMTQ7Z624 323 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 CCDC116Q8IYX3 515 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 LRRC17Q8N6Y2 441 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 OR5P2Q8WZ92 322 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 C11orf24Q96F05 449 aaPredicted RBP10.18□□□□□ -0.78
BRF1-204ENST00000392557 ZFP3Q96NJ6 502 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 AIF1LQ9BQI0 150 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 SGPP1Q9BX95 441 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 TEX10Q9NXF1 929 aaPredicted RBP10.18□□□□□ -0.78
BRF1-204ENST00000392557 ADAM30Q9UKF2 790 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 CSNK1G3Q9Y6M4 447 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 PLPP1O14494 284 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 PPM1DO15297 605 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 HOXB2P14652 356 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 DDCP20711 480 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 PCBP3P57721 371 aaKnown RBP10.18□□□□□ -0.78
BRF1-204ENST00000392557 TEKQ02763 1124 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 PLK5Q496M5 336 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 ANKRD54Q6NXT1 300 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 SLC36A4Q6YBV0 504 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 SLC9B2Q86UD5 537 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 OR6C4Q8NGE1 309 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 AP1M2Q9Y6Q5 423 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 SPAG17Q6Q759 2223 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 C17orf113A0A1B0GUU1 675 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 A0A1W2PPK0 400 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 NPIPB8E9PQR5 432 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 HMGN4O00479 90 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 PXNP49023 591 aaPredicted RBP10.18□□□□□ -0.78
BRF1-204ENST00000392557 ZNF776Q68DI1 518 aaPredicted RBP10.18□□□□□ -0.78
BRF1-204ENST00000392557 PRR23CQ6ZRP0 262 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 RASGRP3Q8IV61 690 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 CLDN22Q8N7P3 220 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 TMEM145Q8NBT3 493 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 QRFPRQ96P65 431 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 ABCG5Q9H222 651 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 NEUROD4Q9HD90 331 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 CD93Q9NPY3 652 aa10.18□□□□□ -0.78
BRF1-204ENST00000392557 RBFOX1Q9NWB1 397 aaKnown RBP10.18□□□□□ -0.78
BRF1-204ENST00000392557 DIMT1Q9UNQ2 313 aaKnown RBP10.18□□□□□ -0.78
BRF1-204ENST00000392557 LSM2Q9Y333 95 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms