RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 BEND6Q5SZJ8 279 aaPredicted RBP0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 TSPO2Q5TGU0 170 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ANKRD20A1Q5TYW2 823 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ANKRD20A3Q5VUR7 823 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 KCTD11Q693B1 232 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 C11orf88Q6PI97 169 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ARSKQ6UWY0 536 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ADAMTSL5Q6ZMM2 481 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 RNF165Q6ZSG1 346 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 PRSS48Q7RTY5 328 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 GPBP1Q86WP2 473 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 SAXO1Q8IYX7 474 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 FAM71E2Q8N5Q1 922 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF433Q8N7K0 673 aaPredicted RBP0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 CCDC71LQ8N9Z2 235 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 LEMD2Q8NC56 503 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 MDS2Q8NDY4 140 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 NEK11Q8NG66 645 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 FBXO30Q8TB52 745 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 SAP25Q8TEE9 199 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 TMEM37Q8WXS4 190 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 PIGCQ92535 297 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 IL22RA2Q969J5 263 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 RAB39BQ96DA2 213 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 DNAJA3Q96EY1 480 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 PANX3Q96QZ0 392 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 MBOAT4Q96T53 435 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 DDX50Q9BQ39 737 aaKnown RBP0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 FAM213AQ9BRX8 229 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 CHRDL1Q9BU40 450 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 CARD6Q9BX69 1037 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ABCG4Q9H172 646 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 TRPV6Q9H1D0 765 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 TNMDQ9H2S6 317 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ZDHHC11Q9H8X9 412 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 PLGRKTQ9HBL7 147 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 PNO1Q9NRX1 252 aaKnown RBP0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 PNPLA3Q9NST1 481 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ZCCHC3Q9NUD5 404 aaKnown RBP0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 DCAF13Q9NV06 445 aaKnown RBP0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 NECAP2Q9NVZ3 263 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 EHFQ9NZC4 300 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 TRPC4Q9UBN4 977 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 DCDC2Q9UHG0 476 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 MAD2L2Q9UI95 211 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 LCMT1Q9UIC8 334 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 BTNL2Q9UIR0 455 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 PURGQ9UJV8 347 aaKnown RBP0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ZNF225Q9UK10 706 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 ERVW-1Q9UQF0 538 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 FKBP7Q9Y680 259 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 PARD3Q8TEW0 1356 aa0.78□□□□□ -2.28
SNORD28B-201ENST00000390993 MYO10Q9HD67 2058 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 TMEM150BA6NC51 233 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 A6NDX4 124 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 ANKRD63C9JTQ0 380 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 TMX2-CTNND1H3BSU7 103 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 RAMP1O60894 148 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 LRP3O75074 770 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 KRTAP5-8O75690 187 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC25A27O95847 323 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 IGSF6O95976 241 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 MMP1P03956 469 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 PLEKP08567 350 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 SLC35G4P0C7Q5 338 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 B4GALT1P15291 398 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 VDAC1P21796 283 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 FCARP24071 287 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 OAS2P29728 719 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 SERPINB6P35237 376 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 GCKP35557 465 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 TRIM23P36406 574 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 NUDT1P36639 197 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 PMELP40967 661 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 RPL29P47914 159 aaKnown RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 RAG2P55895 527 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 SSTP61278 116 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 ASIC1P78348 528 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 ROR1Q01973 937 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 PAX5Q02548 391 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 BTG3Q14201 252 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 GK2Q14410 553 aaPredicted RBP0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 NSDHLQ15738 373 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 CYBRD1Q53TN4 286 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 MPP7Q5T2T1 576 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 NKAIN2Q5VXU1 208 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 SLX4IPQ5VYV7 408 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 SCYL2Q6P3W7 929 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 B3GLCTQ6Y288 498 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 DPY19L2P2Q6ZN68 376 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 LRRC70Q7Z2Q7 622 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 P4HA3Q7Z4N8 544 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 ZNF429Q86V71 674 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 VPS36Q86VN1 386 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 LRP11Q86VZ4 500 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 IFNEQ86WN2 208 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 VSIG1Q86XK7 387 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 STHQ8IWL8 128 aa0.77□□□□□ -2.29
SNORD28B-201ENST00000390993 TMEM61Q8N0U2 210 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms